Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 AC068446.1-201ENST00000556425 1549 ntBASIC6.25□□□□□ -1.41
HERC6Q8IVU3 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 AP000432.2-201ENST00000624164 2048 ntBASIC6.25□□□□□ -1.41
HERC6Q8IVU3 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 AC020656.2-201ENST00000613291 5309 ntBASIC6.25□□□□□ -1.41
HERC6Q8IVU3 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 RPL10P10-201ENST00000403509 664 ntBASIC6.25□□□□□ -1.41
HERC6Q8IVU3 GAPDHP42-201ENST00000406848 981 ntBASIC6.25□□□□□ -1.41
HERC6Q8IVU3 AC007562.1-201ENST00000421819 517 ntBASIC6.25□□□□□ -1.41
HERC6Q8IVU3 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 RPL17P35-201ENST00000432217 549 ntBASIC6.25□□□□□ -1.41
HERC6Q8IVU3 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 AC023274.2-201ENST00000445264 521 ntBASIC6.25□□□□□ -1.41
HERC6Q8IVU3 AL353718.1-201ENST00000451028 517 ntBASIC6.25□□□□□ -1.41
HERC6Q8IVU3 AURKAPS1-201ENST00000451805 1212 ntBASIC6.25□□□□□ -1.41
HERC6Q8IVU3 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 RN7SL51P-201ENST00000468230 285 ntBASIC6.25□□□□□ -1.41
HERC6Q8IVU3 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 RPL7AP6-201ENST00000477943 801 ntBASIC6.25□□□□□ -1.41
HERC6Q8IVU3 RPS21P4-201ENST00000487122 248 ntBASIC6.25□□□□□ -1.41
HERC6Q8IVU3 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 PGAM1P13-201ENST00000507497 754 ntBASIC6.25□□□□□ -1.41
HERC6Q8IVU3 AC008628.1-201ENST00000508663 265 ntBASIC6.25□□□□□ -1.41
HERC6Q8IVU3 FABP5P6-201ENST00000510588 409 ntBASIC6.25□□□□□ -1.41
HERC6Q8IVU3 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 HIGD1AP5-201ENST00000529959 259 ntBASIC6.25□□□□□ -1.41
HERC6Q8IVU3 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 AL136520.1-202ENST00000555494 763 ntBASIC6.25□□□□□ -1.41
HERC6Q8IVU3 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 AL139407.1-201ENST00000613826 1175 ntBASIC6.25□□□□□ -1.41
HERC6Q8IVU3 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HERC6Q8IVU3 AC011503.2-201ENST00000594230 1500 ntBASIC6.25□□□□□ -1.41
HERC6Q8IVU3 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HERC6Q8IVU3 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HERC6Q8IVU3 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HERC6Q8IVU3 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HERC6Q8IVU3 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HERC6Q8IVU3 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HERC6Q8IVU3 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HERC6Q8IVU3 AC245100.2-201ENST00000454544 1679 ntBASIC6.24□□□□□ -1.41
HERC6Q8IVU3 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
HERC6Q8IVU3 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.24□□□□□ -1.41
HERC6Q8IVU3 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HERC6Q8IVU3 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HERC6Q8IVU3 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HERC6Q8IVU3 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.24□□□□□ -1.41
HERC6Q8IVU3 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.24□□□□□ -1.41
HERC6Q8IVU3 RPA2P2-201ENST00000419698 796 ntBASIC6.24□□□□□ -1.41
HERC6Q8IVU3 EIF2S2P3-201ENST00000428356 999 ntBASIC6.24□□□□□ -1.41
HERC6Q8IVU3 AL606490.7-201ENST00000433136 191 ntBASIC6.24□□□□□ -1.41
HERC6Q8IVU3 AL772161.1-201ENST00000439130 476 ntBASIC6.24□□□□□ -1.41
HERC6Q8IVU3 SNRPFP2-201ENST00000440710 251 ntBASIC6.24□□□□□ -1.41
HERC6Q8IVU3 AC002075.1-201ENST00000457396 676 ntBASIC6.24□□□□□ -1.41
HERC6Q8IVU3 MTND6P32-201ENST00000457611 483 ntBASIC6.24□□□□□ -1.41
HERC6Q8IVU3 RPL35AP28-201ENST00000459730 331 ntBASIC6.24□□□□□ -1.41
HERC6Q8IVU3 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.24□□□□□ -1.41
HERC6Q8IVU3 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC6.24□□□□□ -1.41
HERC6Q8IVU3 RN7SL222P-201ENST00000476452 299 ntBASIC6.24□□□□□ -1.41
HERC6Q8IVU3 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC6.24□□□□□ -1.41
HERC6Q8IVU3 AC015864.1-201ENST00000496512 544 ntBASIC6.24□□□□□ -1.41
HERC6Q8IVU3 AC090638.1-201ENST00000498296 909 ntBASIC6.24□□□□□ -1.41
HERC6Q8IVU3 AC139365.2-201ENST00000517972 253 ntBASIC6.24□□□□□ -1.41
HERC6Q8IVU3 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 713 ms