Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 OR5H7P-201ENST00000514084 930 ntBASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 AC022884.2-201ENST00000578535 580 ntBASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 OR8G7P-201ENST00000616658 848 ntBASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 AC087565.3-203ENST00000641018 837 ntBASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 TET1P1-201ENST00000426627 2301 ntBASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 HCFC2P1-201ENST00000392864 1592 ntBASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 AP005432.1-201ENST00000580891 3485 ntBASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 THAP12P5-201ENST00000405864 2275 ntBASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 AC017079.1-201ENST00000333650 415 ntBASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 RNU6-249P-201ENST00000363016 102 ntBASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 OR7E101P-201ENST00000400428 513 ntBASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 CTSL3P-202ENST00000412179 788 ntBASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 RPL12P17-201ENST00000432393 498 ntBASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 AC012512.1-201ENST00000446594 718 ntBASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 RPS4XP12-201ENST00000461747 709 ntBASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 EIF4E2P2-201ENST00000492033 736 ntBASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 LSM3P4-201ENST00000502948 309 ntBASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 AC090181.3-201ENST00000624777 1514 ntBASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 IFIT1P1-201ENST00000400497 1449 ntBASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 AL353796.1-201ENST00000561542 3241 ntBASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 AL022322.2-201ENST00000624072 20397 ntBASIC5.31□□□□□ -1.56
NUDCD3Q8IVD9 SRRM1P3-201ENST00000426911 2678 ntBASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 NEPNP-201ENST00000404786 1371 ntBASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 RN7SKP153-201ENST00000365026 316 ntBASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 OR6D1P-201ENST00000436165 939 ntBASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 AMYP1-201ENST00000440059 1023 ntBASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 TIMM8BP2-201ENST00000445940 251 ntBASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 VDAC2P4-201ENST00000452925 711 ntBASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 RNU7-157P-201ENST00000459600 66 ntBASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 AC069304.1-201ENST00000491593 704 ntBASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 MTND6P2-201ENST00000512226 524 ntBASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms