Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 AC004074.1-201ENST00000421810 1063 ntBASIC5.23□□□□□ -1.57
RIF1Q5UIP0 RPL7P57-201ENST00000423238 740 ntBASIC5.23□□□□□ -1.57
RIF1Q5UIP0 RPL12P28-201ENST00000430852 489 ntBASIC5.23□□□□□ -1.57
RIF1Q5UIP0 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 Z95327.1-201ENST00000446082 482 ntBASIC5.23□□□□□ -1.57
RIF1Q5UIP0 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 AP002812.1-201ENST00000495378 474 ntBASIC5.23□□□□□ -1.57
RIF1Q5UIP0 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 RPSAP51-201ENST00000497462 645 ntBASIC5.23□□□□□ -1.57
RIF1Q5UIP0 SCARNA16.4-201ENST00000516956 187 ntBASIC5.23□□□□□ -1.57
RIF1Q5UIP0 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 AC020915.5-201ENST00000596836 964 ntBASIC5.23□□□□□ -1.57
RIF1Q5UIP0 AC005377.1-201ENST00000605126 456 ntBASIC5.23□□□□□ -1.57
RIF1Q5UIP0 AL356218.2-201ENST00000605264 187 ntBASIC5.23□□□□□ -1.57
RIF1Q5UIP0 AC024589.2-201ENST00000605642 1294 ntBASIC5.23□□□□□ -1.57
RIF1Q5UIP0 AC022905.1-201ENST00000503430 3048 ntBASIC5.23□□□□□ -1.57
RIF1Q5UIP0 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RIF1Q5UIP0 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 RPSAP35-201ENST00000413753 818 ntBASIC5.22□□□□□ -1.57
RIF1Q5UIP0 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 NPM1P51-201ENST00000443470 744 ntBASIC5.22□□□□□ -1.57
RIF1Q5UIP0 AC023424.1-201ENST00000496058 459 ntBASIC5.22□□□□□ -1.57
RIF1Q5UIP0 OR8G5-201ENST00000524943 1041 ntBASIC5.22□□□□□ -1.57
RIF1Q5UIP0 OR5AM1P-201ENST00000532136 1032 ntBASIC5.22□□□□□ -1.57
RIF1Q5UIP0 AC090424.1-201ENST00000535243 736 ntBASIC5.22□□□□□ -1.57
RIF1Q5UIP0 MIR4691-201ENST00000583764 85 ntBASIC5.22□□□□□ -1.57
RIF1Q5UIP0 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 NANOGP3-201ENST00000605855 286 ntBASIC5.22□□□□□ -1.57
RIF1Q5UIP0 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 AC092070.2-203ENST00000598377 3644 ntBASIC5.22□□□□□ -1.57
RIF1Q5UIP0 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.22□□□□□ -1.57
RIF1Q5UIP0 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 AC006967.1-201ENST00000467608 589 ntBASIC5.22□□□□□ -1.57
RIF1Q5UIP0 NDUFB4P12-201ENST00000513465 390 ntBASIC5.22□□□□□ -1.57
RIF1Q5UIP0 RNA5SP464-201ENST00000516251 108 ntBASIC5.22□□□□□ -1.57
RIF1Q5UIP0 RN7SKP253-201ENST00000516424 309 ntBASIC5.22□□□□□ -1.57
RIF1Q5UIP0 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RIF1Q5UIP0 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
RIF1Q5UIP0 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
RIF1Q5UIP0 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
RIF1Q5UIP0 RPL12P34-201ENST00000424532 479 ntBASIC5.21□□□□□ -1.57
RIF1Q5UIP0 AC073465.2-201ENST00000440938 498 ntBASIC5.21□□□□□ -1.57
RIF1Q5UIP0 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.21□□□□□ -1.57
RIF1Q5UIP0 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.21□□□□□ -1.57
RIF1Q5UIP0 OR7A15P-201ENST00000449848 1009 ntBASIC5.21□□□□□ -1.57
RIF1Q5UIP0 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.21□□□□□ -1.57
RIF1Q5UIP0 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.21□□□□□ -1.57
RIF1Q5UIP0 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.21□□□□□ -1.57
RIF1Q5UIP0 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.21□□□□□ -1.57
RIF1Q5UIP0 SSX8-201ENST00000506270 579 ntBASIC5.21□□□□□ -1.57
RIF1Q5UIP0 MRPS33P2-201ENST00000507850 322 ntBASIC5.21□□□□□ -1.57
RIF1Q5UIP0 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.21□□□□□ -1.57
RIF1Q5UIP0 AP000619.2-201ENST00000546014 969 ntBASIC5.21□□□□□ -1.57
RIF1Q5UIP0 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.21□□□□□ -1.57
RIF1Q5UIP0 AC079414.3-201ENST00000612986 1090 ntBASIC5.21□□□□□ -1.57
RIF1Q5UIP0 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
RIF1Q5UIP0 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
RIF1Q5UIP0 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.21□□□□□ -1.57
RIF1Q5UIP0 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RIF1Q5UIP0 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RIF1Q5UIP0 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
RIF1Q5UIP0 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RIF1Q5UIP0 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms