Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 EGF-204ENST00000503392 3642 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
VARS2Q5ST30 IL1R1-208ENST00000424272 2658 ntTSL 5 BASIC8.52□□□□□ -1.05
VARS2Q5ST30 AC145207.5-201ENST00000582866 2682 ntBASIC8.52□□□□□ -1.05
VARS2Q5ST30 OR51E1-202ENST00000530215 2942 ntBASIC8.52□□□□□ -1.05
VARS2Q5ST30 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
VARS2Q5ST30 GP2-201ENST00000302555 3406 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
VARS2Q5ST30 TDRD9-201ENST00000339063 3447 ntTSL 5 BASIC8.52□□□□□ -1.05
VARS2Q5ST30 ERCC6-208ENST00000515869 3439 ntTSL 2 BASIC8.52□□□□□ -1.05
VARS2Q5ST30 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
VARS2Q5ST30 YAP1-203ENST00000524575 1638 ntTSL 2 BASIC8.52□□□□□ -1.05
VARS2Q5ST30 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
VARS2Q5ST30 RNU6-1120P-201ENST00000362988 108 ntBASIC8.52□□□□□ -1.05
VARS2Q5ST30 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC8.52□□□□□ -1.05
VARS2Q5ST30 RNU6-1027P-201ENST00000383998 107 ntBASIC8.52□□□□□ -1.05
VARS2Q5ST30 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
VARS2Q5ST30 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
VARS2Q5ST30 AC234782.4-201ENST00000417646 1048 ntBASIC8.52□□□□□ -1.05
VARS2Q5ST30 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC8.52□□□□□ -1.05
VARS2Q5ST30 AKR1B10P1-201ENST00000425765 942 ntBASIC8.52□□□□□ -1.05
VARS2Q5ST30 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC8.52□□□□□ -1.05
VARS2Q5ST30 AL356276.2-201ENST00000435919 558 ntBASIC8.52□□□□□ -1.05
VARS2Q5ST30 AC092809.1-201ENST00000441469 474 ntBASIC8.52□□□□□ -1.05
VARS2Q5ST30 AC239860.1-201ENST00000444680 1270 ntBASIC8.52□□□□□ -1.05
VARS2Q5ST30 ARL2BPP7-201ENST00000446421 490 ntBASIC8.52□□□□□ -1.05
VARS2Q5ST30 AC239798.1-201ENST00000449024 1176 ntBASIC8.52□□□□□ -1.05
VARS2Q5ST30 AL157714.2-204ENST00000452283 973 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
VARS2Q5ST30 RPL10P6-201ENST00000457497 318 ntBASIC8.52□□□□□ -1.05
VARS2Q5ST30 TAAR3P-202ENST00000481759 1025 ntBASIC8.52□□□□□ -1.05
VARS2Q5ST30 AC114300.1-201ENST00000502347 280 ntBASIC8.52□□□□□ -1.05
VARS2Q5ST30 AC006390.1-201ENST00000508068 283 ntBASIC8.52□□□□□ -1.05
VARS2Q5ST30 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC8.52□□□□□ -1.05
VARS2Q5ST30 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC8.52□□□□□ -1.05
VARS2Q5ST30 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC8.52□□□□□ -1.05
VARS2Q5ST30 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC8.52□□□□□ -1.05
VARS2Q5ST30 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
VARS2Q5ST30 CASP1-216ENST00000534497 825 ntTSL 5 BASIC8.52□□□□□ -1.05
VARS2Q5ST30 MIR4685-201ENST00000578185 69 ntBASIC8.52□□□□□ -1.05
VARS2Q5ST30 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC8.52□□□□□ -1.05
VARS2Q5ST30 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC8.52□□□□□ -1.05
VARS2Q5ST30 AC026336.5-201ENST00000624455 738 ntBASIC8.52□□□□□ -1.05
VARS2Q5ST30 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC8.52□□□□□ -1.05
VARS2Q5ST30 OR2L1P-202ENST00000641567 1023 ntBASIC8.52□□□□□ -1.05
VARS2Q5ST30 CYP4A22-202ENST00000371890 1780 ntTSL 5 BASIC8.52□□□□□ -1.05
VARS2Q5ST30 AL391095.1-201ENST00000422519 2004 ntTSL 2 BASIC8.52□□□□□ -1.05
VARS2Q5ST30 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC8.52□□□□□ -1.05
VARS2Q5ST30 AL136146.1-201ENST00000529830 1667 ntBASIC8.52□□□□□ -1.05
VARS2Q5ST30 DET1-202ENST00000444300 2154 ntTSL 5 BASIC8.52□□□□□ -1.05
VARS2Q5ST30 AC117382.2-201ENST00000564748 3151 ntBASIC8.52□□□□□ -1.05
VARS2Q5ST30 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
VARS2Q5ST30 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
VARS2Q5ST30 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
VARS2Q5ST30 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
VARS2Q5ST30 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC8.51□□□□□ -1.05
VARS2Q5ST30 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
VARS2Q5ST30 CD101-201ENST00000256652 3283 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
VARS2Q5ST30 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC8.51□□□□□ -1.05
VARS2Q5ST30 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
VARS2Q5ST30 PSG8-203ENST00000404209 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
VARS2Q5ST30 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC8.51□□□□□ -1.05
VARS2Q5ST30 CDC27P3-201ENST00000635418 1910 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC8.51□□□□□ -1.05
VARS2Q5ST30 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC8.51□□□□□ -1.05
VARS2Q5ST30 LRRC37A6P-202ENST00000448648 5444 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 IKZF3-207ENST00000377944 1669 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
VARS2Q5ST30 IKZF3-208ENST00000377945 1696 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
VARS2Q5ST30 SMG1P1-202ENST00000309865 4223 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 RPL23AP57-201ENST00000332361 466 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
VARS2Q5ST30 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC8.51□□□□□ -1.05
VARS2Q5ST30 RNA5SP463-201ENST00000363030 120 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 RNU6-1188P-201ENST00000363795 107 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 MIR431-201ENST00000385266 114 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
VARS2Q5ST30 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
VARS2Q5ST30 CD3D-202ENST00000392884 476 ntTSL 2 BASIC8.51□□□□□ -1.05
VARS2Q5ST30 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC8.51□□□□□ -1.05
VARS2Q5ST30 CRIP1P3-201ENST00000416794 220 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC8.51□□□□□ -1.05
VARS2Q5ST30 BLOC1S2P1-201ENST00000428431 301 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 Z83313.1-201ENST00000433780 718 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC8.51□□□□□ -1.05
VARS2Q5ST30 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC8.51□□□□□ -1.05
VARS2Q5ST30 BNIP3P2-201ENST00000441221 577 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC8.51□□□□□ -1.05
VARS2Q5ST30 AC007383.1-201ENST00000445875 636 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 RPL30P15-201ENST00000457129 321 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
VARS2Q5ST30 AC117394.1-201ENST00000477323 567 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 AC108693.1-201ENST00000496068 432 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 AC107220.1-201ENST00000514347 1037 ntTSL 3 BASIC8.51□□□□□ -1.05
VARS2Q5ST30 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC8.51□□□□□ -1.05
VARS2Q5ST30 RNU6-964P-201ENST00000516524 69 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 Y_RNA.700-201ENST00000516806 100 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 AC008429.4-201ENST00000521201 182 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
VARS2Q5ST30 AP001994.1-201ENST00000527539 826 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
VARS2Q5ST30 AC018523.1-201ENST00000534211 512 ntBASIC8.51□□□□□ -1.05
VARS2Q5ST30 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC8.51□□□□□ -1.05
VARS2Q5ST30 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms