Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDH1Q08174 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDH1Q08174 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDH1Q08174 RNU4-81P-201ENST00000363561 144 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 Y_RNA.256-201ENST00000364594 104 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 Y_RNA.582-201ENST00000391023 95 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDH1Q08174 RN7SKP56-201ENST00000410513 331 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 RN7SKP59-201ENST00000410520 314 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDH1Q08174 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDH1Q08174 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDH1Q08174 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 AL139158.1-201ENST00000424719 340 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 USP12PX-201ENST00000432383 1057 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDH1Q08174 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 SEPT7P5-201ENST00000434048 306 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 AC242426.1-201ENST00000435270 960 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDH1Q08174 AC093716.1-201ENST00000435923 377 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.84□□□□□ -1.31
PCDH1Q08174 AL662791.1-201ENST00000441992 928 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDH1Q08174 MTND3P10-201ENST00000450967 341 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 PNPLA4P1-201ENST00000458328 305 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDH1Q08174 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDH1Q08174 RPS14P8-201ENST00000478778 369 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 AF305872.1-201ENST00000485217 471 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 RPS4XP15-201ENST00000489210 795 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 AC026826.1-201ENST00000493002 361 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 AL358832.1-201ENST00000497800 389 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 DYNLL1P6-201ENST00000503440 264 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 FAM92A1P2-202ENST00000504766 877 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDH1Q08174 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDH1Q08174 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDH1Q08174 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDH1Q08174 CYP4F27P-201ENST00000514557 494 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 RN7SKP98-201ENST00000517070 156 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDH1Q08174 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.84□□□□□ -1.31
PCDH1Q08174 AP001804.2-201ENST00000533932 910 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDH1Q08174 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDH1Q08174 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.84□□□□□ -1.31
PCDH1Q08174 IGLJCOR18-201ENST00000584002 424 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDH1Q08174 AC111186.1-201ENST00000604684 130 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDH1Q08174 AC063962.1-201ENST00000608199 521 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 AL135999.3-201ENST00000610501 812 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 AC097641.3-201ENST00000613523 464 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 AC116165.3-201ENST00000614524 400 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 AL445670.1-201ENST00000618889 801 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 AC006840.1-201ENST00000623069 542 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDH1Q08174 AC183089.2-201ENST00000637931 916 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
PCDH1Q08174 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
PCDH1Q08174 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDH1Q08174 CASC19-243ENST00000641588 1546 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDH1Q08174 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDH1Q08174 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDH1Q08174 AL356361.1-201ENST00000400943 1459 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDH1Q08174 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDH1Q08174 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDH1Q08174 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
PCDH1Q08174 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.84□□□□□ -1.32
PCDH1Q08174 MROH3P-201ENST00000435735 2676 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH1Q08174 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
PCDH1Q08174 PABPC1P9-201ENST00000426076 1612 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDH1Q08174 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDH1Q08174 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.83□□□□□ -1.32
PCDH1Q08174 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH1Q08174 TUBBP10-201ENST00000427668 1301 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDH1Q08174 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDH1Q08174 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDH1Q08174 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDH1Q08174 CR383658.2-201ENST00000547576 1525 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDH1Q08174 HMGB1P5-201ENST00000255320 642 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 MIR640-201ENST00000385086 96 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 RPS3AP5-201ENST00000389400 821 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH1Q08174 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH1Q08174 RNA5SP177-201ENST00000410122 107 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 RNU2-41P-201ENST00000410991 178 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDH1Q08174 SNX18P13-201ENST00000412442 529 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH1Q08174 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC6.83□□□□□ -1.32
PCDH1Q08174 RPL21P32-201ENST00000419877 477 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 RPL7P30-201ENST00000420888 709 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms