Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.87□□□□□ -1.63
H3F3AP84243 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.87□□□□□ -1.63
H3F3AP84243 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.87□□□□□ -1.63
H3F3AP84243 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
H3F3AP84243 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
H3F3AP84243 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
H3F3AP84243 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
H3F3AP84243 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3AP84243 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3AP84243 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3AP84243 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.86□□□□□ -1.63
H3F3AP84243 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
H3F3AP84243 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
H3F3AP84243 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.86□□□□□ -1.63
H3F3AP84243 SNORA16A-201ENST00000384342 137 ntBASIC4.86□□□□□ -1.63
H3F3AP84243 SNORD56.6-201ENST00000384569 71 ntBASIC4.86□□□□□ -1.63
H3F3AP84243 PPIAP9-201ENST00000403866 498 ntBASIC4.86□□□□□ -1.63
H3F3AP84243 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3AP84243 AC079809.1-201ENST00000415468 276 ntBASIC4.86□□□□□ -1.63
H3F3AP84243 AL133482.1-201ENST00000415988 498 ntBASIC4.86□□□□□ -1.63
H3F3AP84243 AL513325.1-201ENST00000417716 1034 ntBASIC4.86□□□□□ -1.63
H3F3AP84243 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3AP84243 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.86□□□□□ -1.63
H3F3AP84243 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.86□□□□□ -1.63
H3F3AP84243 MTND2P40-201ENST00000436718 841 ntBASIC4.86□□□□□ -1.63
H3F3AP84243 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.86□□□□□ -1.63
H3F3AP84243 AL359265.1-201ENST00000440296 795 ntBASIC4.86□□□□□ -1.63
H3F3AP84243 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.86□□□□□ -1.63
H3F3AP84243 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.86□□□□□ -1.63
H3F3AP84243 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.86□□□□□ -1.63
H3F3AP84243 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.86□□□□□ -1.63
H3F3AP84243 RN7SL51P-201ENST00000468230 285 ntBASIC4.86□□□□□ -1.63
H3F3AP84243 AC100832.1-201ENST00000471945 383 ntBASIC4.86□□□□□ -1.63
H3F3AP84243 RN7SL174P-201ENST00000475578 289 ntBASIC4.86□□□□□ -1.63
H3F3AP84243 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.86□□□□□ -1.63
H3F3AP84243 AC109464.1-201ENST00000511091 819 ntBASIC4.86□□□□□ -1.63
H3F3AP84243 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.86□□□□□ -1.63
H3F3AP84243 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.86□□□□□ -1.63
H3F3AP84243 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.86□□□□□ -1.63
H3F3AP84243 BLZF2P-201ENST00000553776 1130 ntBASIC4.86□□□□□ -1.63
H3F3AP84243 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3AP84243 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3AP84243 AC060766.1-201ENST00000590824 627 ntBASIC4.86□□□□□ -1.63
H3F3AP84243 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3AP84243 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.86□□□□□ -1.63
H3F3AP84243 AC007786.3-201ENST00000615154 596 ntBASIC4.86□□□□□ -1.63
H3F3AP84243 WBP1LP8-201ENST00000617401 327 ntBASIC4.86□□□□□ -1.63
H3F3AP84243 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.86□□□□□ -1.63
H3F3AP84243 MIR4302-201ENST00000638058 60 ntBASIC4.86□□□□□ -1.63
H3F3AP84243 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.86□□□□□ -1.63
H3F3AP84243 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
H3F3AP84243 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
H3F3AP84243 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3AP84243 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.86□□□□□ -1.63
H3F3AP84243 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.86□□□□□ -1.63
H3F3AP84243 AC008079.2-201ENST00000623543 20396 ntBASIC4.86□□□□□ -1.63
H3F3AP84243 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3AP84243 AC003985.2-201ENST00000562268 1669 ntBASIC4.86□□□□□ -1.63
H3F3AP84243 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3AP84243 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
H3F3AP84243 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.85□□□□□ -1.63
H3F3AP84243 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3AP84243 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3AP84243 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3AP84243 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3AP84243 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3AP84243 AP001029.2-203ENST00000589795 4910 ntBASIC4.85□□□□□ -1.63
H3F3AP84243 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
H3F3AP84243 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.85□□□□□ -1.63
H3F3AP84243 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3AP84243 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3AP84243 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.85□□□□□ -1.63
H3F3AP84243 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.85□□□□□ -1.63
H3F3AP84243 RPL7P45-201ENST00000455851 743 ntBASIC4.85□□□□□ -1.63
H3F3AP84243 RN7SL184P-201ENST00000488308 297 ntBASIC4.85□□□□□ -1.63
H3F3AP84243 RN7SL547P-201ENST00000490793 290 ntBASIC4.85□□□□□ -1.63
H3F3AP84243 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.85□□□□□ -1.63
H3F3AP84243 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.85□□□□□ -1.63
H3F3AP84243 SCARNA16.4-201ENST00000516956 187 ntBASIC4.85□□□□□ -1.63
H3F3AP84243 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.85□□□□□ -1.63
H3F3AP84243 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.85□□□□□ -1.63
H3F3AP84243 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
H3F3AP84243 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.85□□□□□ -1.63
H3F3AP84243 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.85□□□□□ -1.63
H3F3AP84243 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.85□□□□□ -1.63
H3F3AP84243 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.85□□□□□ -1.63
H3F3AP84243 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.85□□□□□ -1.63
H3F3AP84243 SUGT1P3-202ENST00000604259 383 ntBASIC4.85□□□□□ -1.63
H3F3AP84243 AL359513.1-201ENST00000614364 557 ntBASIC4.85□□□□□ -1.63
H3F3AP84243 AC007204.2-201ENST00000615022 616 ntBASIC4.85□□□□□ -1.63
H3F3AP84243 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3AP84243 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3AP84243 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3AP84243 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
H3F3AP84243 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.85□□□□□ -1.63
H3F3AP84243 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3AP84243 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3AP84243 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.85□□□□□ -1.63
H3F3AP84243 PROS2P-201ENST00000474651 1951 ntBASIC4.85□□□□□ -1.63
H3F3AP84243 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms