Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NKX6-1P78426 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.72□□□□□ -1.49
NKX6-1P78426 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.72□□□□□ -1.49
NKX6-1P78426 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NKX6-1P78426 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NKX6-1P78426 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NKX6-1P78426 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NKX6-1P78426 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
NKX6-1P78426 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
NKX6-1P78426 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
NKX6-1P78426 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
NKX6-1P78426 AC111188.2-201ENST00000529697 1387 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 AC005618.1-201ENST00000606901 3148 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
NKX6-1P78426 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
NKX6-1P78426 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.71□□□□□ -1.5
NKX6-1P78426 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.71□□□□□ -1.5
NKX6-1P78426 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NKX6-1P78426 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
NKX6-1P78426 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NKX6-1P78426 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
NKX6-1P78426 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
NKX6-1P78426 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NKX6-1P78426 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
NKX6-1P78426 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
NKX6-1P78426 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NKX6-1P78426 RNU6-353P-201ENST00000364266 108 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NKX6-1P78426 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NKX6-1P78426 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.71□□□□□ -1.5
NKX6-1P78426 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NKX6-1P78426 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.71□□□□□ -1.5
NKX6-1P78426 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.71□□□□□ -1.5
NKX6-1P78426 RN7SKP278-201ENST00000410504 342 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 AC092745.2-202ENST00000411880 369 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.71□□□□□ -1.5
NKX6-1P78426 AC016769.2-201ENST00000414815 475 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.71□□□□□ -1.5
NKX6-1P78426 AL359092.1-201ENST00000417156 265 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.71□□□□□ -1.5
NKX6-1P78426 AC097721.1-201ENST00000427150 1253 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 HIGD1AP12-201ENST00000427832 281 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.71□□□□□ -1.5
NKX6-1P78426 AC022022.1-201ENST00000430304 178 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 RPL7P34-201ENST00000433316 712 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.71□□□□□ -1.5
NKX6-1P78426 ARL5AP2-201ENST00000444698 533 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.71□□□□□ -1.5
NKX6-1P78426 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.71□□□□□ -1.5
NKX6-1P78426 RNU7-140P-201ENST00000459546 60 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.71□□□□□ -1.5
NKX6-1P78426 RPL7P40-201ENST00000481703 745 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.71□□□□□ -1.5
NKX6-1P78426 RN7SL214P-201ENST00000487317 265 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.71□□□□□ -1.5
NKX6-1P78426 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.71□□□□□ -1.5
NKX6-1P78426 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.71□□□□□ -1.5
NKX6-1P78426 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5.71□□□□□ -1.5
NKX6-1P78426 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.71□□□□□ -1.5
NKX6-1P78426 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.71□□□□□ -1.5
NKX6-1P78426 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.71□□□□□ -1.5
NKX6-1P78426 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.71□□□□□ -1.5
NKX6-1P78426 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NKX6-1P78426 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.71□□□□□ -1.5
NKX6-1P78426 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.71□□□□□ -1.5
NKX6-1P78426 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.71□□□□□ -1.5
NKX6-1P78426 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.71□□□□□ -1.5
NKX6-1P78426 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
NKX6-1P78426 MIR4433B-201ENST00000581329 102 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.71□□□□□ -1.5
NKX6-1P78426 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.71□□□□□ -1.5
NKX6-1P78426 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.71□□□□□ -1.5
NKX6-1P78426 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.71□□□□□ -1.5
NKX6-1P78426 AP001542.2-201ENST00000593141 364 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 BNIP3P24-201ENST00000593398 557 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 VN1R78P-201ENST00000597393 564 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.71□□□□□ -1.5
NKX6-1P78426 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.71□□□□□ -1.5
NKX6-1P78426 AC021749.1-201ENST00000604322 607 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 AC107952.2-201ENST00000606048 486 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 SNORD96A-201ENST00000606577 79 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.71□□□□□ -1.5
NKX6-1P78426 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.71□□□□□ -1.5
NKX6-1P78426 AL445423.1-201ENST00000609941 536 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 AC009237.15-201ENST00000610252 501 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 AL135999.3-201ENST00000610501 812 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 AC026124.2-201ENST00000621847 656 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 AC018692.2-201ENST00000624130 348 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.71□□□□□ -1.5
NKX6-1P78426 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.71□□□□□ -1.5
NKX6-1P78426 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.71□□□□□ -1.5
NKX6-1P78426 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.71□□□□□ -1.5
NKX6-1P78426 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.71□□□□□ -1.5
NKX6-1P78426 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NKX6-1P78426 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.71□□□□□ -1.5
NKX6-1P78426 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
NKX6-1P78426 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NKX6-1P78426 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
NKX6-1P78426 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NKX6-1P78426 TATDN2P3-201ENST00000452855 3665 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms