Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 OR11H3P-201ENST00000554547 982 ntBASIC6.39□□□□□ -1.39
YBX1P67809 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.39□□□□□ -1.39
YBX1P67809 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.39□□□□□ -1.39
YBX1P67809 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC6.39□□□□□ -1.39
YBX1P67809 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.39□□□□□ -1.39
YBX1P67809 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.39□□□□□ -1.39
YBX1P67809 AC011497.2-201ENST00000600255 639 ntBASIC6.39□□□□□ -1.39
YBX1P67809 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC6.39□□□□□ -1.39
YBX1P67809 AL157899.1-201ENST00000604110 936 ntBASIC6.39□□□□□ -1.39
YBX1P67809 AC009237.12-201ENST00000604755 742 ntBASIC6.39□□□□□ -1.39
YBX1P67809 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.39□□□□□ -1.39
YBX1P67809 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC6.39□□□□□ -1.39
YBX1P67809 AC008083.4-201ENST00000615076 444 ntBASIC6.39□□□□□ -1.39
YBX1P67809 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.39□□□□□ -1.39
YBX1P67809 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.39□□□□□ -1.39
YBX1P67809 AC211486.4-201ENST00000621495 113 ntBASIC6.39□□□□□ -1.39
YBX1P67809 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
YBX1P67809 AC018692.2-201ENST00000624130 348 ntBASIC6.39□□□□□ -1.39
YBX1P67809 AL356596.1-201ENST00000624230 379 ntBASIC6.39□□□□□ -1.39
YBX1P67809 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.39□□□□□ -1.39
YBX1P67809 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.39□□□□□ -1.39
YBX1P67809 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
YBX1P67809 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
YBX1P67809 ZNF849P-201ENST00000594711 1566 ntBASIC6.39□□□□□ -1.39
YBX1P67809 AL731556.1-201ENST00000394628 3711 ntBASIC6.39□□□□□ -1.39
YBX1P67809 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
YBX1P67809 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
YBX1P67809 CR848007.1-201ENST00000442354 1699 ntBASIC6.39□□□□□ -1.39
YBX1P67809 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
YBX1P67809 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.39□□□□□ -1.39
YBX1P67809 AC025809.2-201ENST00000625085 1802 ntBASIC6.39□□□□□ -1.39
YBX1P67809 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.39□□□□□ -1.39
YBX1P67809 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
YBX1P67809 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
YBX1P67809 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
YBX1P67809 EPS15P1-202ENST00000459691 2071 ntBASIC6.38□□□□□ -1.39
YBX1P67809 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
YBX1P67809 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
YBX1P67809 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
YBX1P67809 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
YBX1P67809 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
YBX1P67809 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
YBX1P67809 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
YBX1P67809 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
YBX1P67809 AC010894.1-201ENST00000313760 361 ntBASIC6.38□□□□□ -1.39
YBX1P67809 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
YBX1P67809 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
YBX1P67809 RNA5SP333-201ENST00000363466 118 ntBASIC6.38□□□□□ -1.39
YBX1P67809 SNORA38B-201ENST00000363524 131 ntBASIC6.38□□□□□ -1.39
YBX1P67809 RNA5SP334-201ENST00000364825 118 ntBASIC6.38□□□□□ -1.39
YBX1P67809 RNA5SP85-201ENST00000365378 119 ntBASIC6.38□□□□□ -1.39
YBX1P67809 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC6.38□□□□□ -1.39
YBX1P67809 U3.28-201ENST00000391249 210 ntBASIC6.38□□□□□ -1.39
YBX1P67809 AL031577.2-201ENST00000404133 280 ntBASIC6.38□□□□□ -1.39
YBX1P67809 AL033519.1-201ENST00000407266 307 ntBASIC6.38□□□□□ -1.39
YBX1P67809 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.38□□□□□ -1.39
YBX1P67809 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
YBX1P67809 PNRC2P1-201ENST00000423940 420 ntBASIC6.38□□□□□ -1.39
YBX1P67809 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC6.38□□□□□ -1.39
YBX1P67809 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
YBX1P67809 AC092106.2-201ENST00000436597 487 ntBASIC6.38□□□□□ -1.39
YBX1P67809 AC064862.5-201ENST00000440618 334 ntBASIC6.38□□□□□ -1.39
YBX1P67809 AC234771.4-201ENST00000441416 730 ntBASIC6.38□□□□□ -1.39
YBX1P67809 WDR82P2-201ENST00000444540 928 ntBASIC6.38□□□□□ -1.39
YBX1P67809 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.38□□□□□ -1.39
YBX1P67809 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC6.38□□□□□ -1.39
YBX1P67809 ELOCP23-201ENST00000452014 332 ntBASIC6.38□□□□□ -1.39
YBX1P67809 OR2AF1P-201ENST00000454899 889 ntBASIC6.38□□□□□ -1.39
YBX1P67809 RPL7L1P3-201ENST00000455249 689 ntBASIC6.38□□□□□ -1.39
YBX1P67809 RNU6-956P-201ENST00000458868 103 ntBASIC6.38□□□□□ -1.39
YBX1P67809 RPL30P6-201ENST00000475925 342 ntBASIC6.38□□□□□ -1.39
YBX1P67809 AC116353.2-201ENST00000505332 712 ntBASIC6.38□□□□□ -1.39
YBX1P67809 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.38□□□□□ -1.39
YBX1P67809 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.38□□□□□ -1.39
YBX1P67809 MINOS1P4-201ENST00000515470 318 ntBASIC6.38□□□□□ -1.39
YBX1P67809 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.38□□□□□ -1.39
YBX1P67809 HIGD1AP10-201ENST00000527837 282 ntBASIC6.38□□□□□ -1.39
YBX1P67809 AP000873.5-201ENST00000533906 236 ntBASIC6.38□□□□□ -1.39
YBX1P67809 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.38□□□□□ -1.39
YBX1P67809 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
YBX1P67809 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.38□□□□□ -1.39
YBX1P67809 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.38□□□□□ -1.39
YBX1P67809 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC6.38□□□□□ -1.39
YBX1P67809 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC6.38□□□□□ -1.39
YBX1P67809 DUXAP1-201ENST00000556632 463 ntBASIC6.38□□□□□ -1.39
YBX1P67809 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.38□□□□□ -1.39
YBX1P67809 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.38□□□□□ -1.39
YBX1P67809 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.38□□□□□ -1.39
YBX1P67809 AL049840.5-201ENST00000602827 552 ntBASIC6.38□□□□□ -1.39
YBX1P67809 AL583832.1-201ENST00000603227 784 ntBASIC6.38□□□□□ -1.39
YBX1P67809 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
YBX1P67809 AC068726.1-201ENST00000610993 341 ntBASIC6.38□□□□□ -1.39
YBX1P67809 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.38□□□□□ -1.39
YBX1P67809 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.38□□□□□ -1.39
YBX1P67809 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC6.38□□□□□ -1.39
YBX1P67809 ZNF833P-201ENST00000424938 1494 ntBASIC6.38□□□□□ -1.39
YBX1P67809 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
YBX1P67809 API5P1-201ENST00000424316 1510 ntBASIC6.38□□□□□ -1.39
YBX1P67809 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.38□□□□□ -1.39
YBX1P67809 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms