Protein–RNA interactions for Protein: P63316

TNNC1, Troponin C, slow skeletal and cardiac muscles, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNC1P63316 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.89□□□□□ -1.47
TNNC1P63316 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.89□□□□□ -1.47
TNNC1P63316 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TNNC1P63316 AC026367.3-201ENST00000619032 590 ntBASIC5.89□□□□□ -1.47
TNNC1P63316 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.89□□□□□ -1.47
TNNC1P63316 AC016542.2-201ENST00000624201 619 ntBASIC5.89□□□□□ -1.47
TNNC1P63316 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.89□□□□□ -1.47
TNNC1P63316 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TNNC1P63316 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TNNC1P63316 AC026523.2-201ENST00000625039 7739 ntBASIC5.89□□□□□ -1.47
TNNC1P63316 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TNNC1P63316 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TNNC1P63316 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
TNNC1P63316 AC112198.2-201ENST00000426589 6996 ntBASIC5.89□□□□□ -1.47
TNNC1P63316 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.89□□□□□ -1.47
TNNC1P63316 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
TNNC1P63316 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TNNC1P63316 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.88□□□□□ -1.47
TNNC1P63316 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TNNC1P63316 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TNNC1P63316 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TNNC1P63316 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.88□□□□□ -1.47
TNNC1P63316 SNORD56.6-201ENST00000384569 71 ntBASIC5.88□□□□□ -1.47
TNNC1P63316 RNA5SP241-201ENST00000391326 114 ntBASIC5.88□□□□□ -1.47
TNNC1P63316 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.88□□□□□ -1.47
TNNC1P63316 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.88□□□□□ -1.47
TNNC1P63316 AC079355.1-201ENST00000421770 223 ntBASIC5.88□□□□□ -1.47
TNNC1P63316 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.88□□□□□ -1.47
TNNC1P63316 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TNNC1P63316 AC105399.1-202ENST00000447303 205 ntBASIC5.88□□□□□ -1.47
TNNC1P63316 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.88□□□□□ -1.47
TNNC1P63316 AZGP1P2-201ENST00000454506 345 ntBASIC5.88□□□□□ -1.47
TNNC1P63316 SIAH1P1-201ENST00000479411 923 ntBASIC5.88□□□□□ -1.47
TNNC1P63316 AC108693.1-201ENST00000496068 432 ntBASIC5.88□□□□□ -1.47
TNNC1P63316 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TNNC1P63316 MTND6P2-201ENST00000512226 524 ntBASIC5.88□□□□□ -1.47
TNNC1P63316 SCARNA16.4-201ENST00000516956 187 ntBASIC5.88□□□□□ -1.47
TNNC1P63316 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.88□□□□□ -1.47
TNNC1P63316 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.88□□□□□ -1.47
TNNC1P63316 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.88□□□□□ -1.47
TNNC1P63316 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TNNC1P63316 SUGT1P3-202ENST00000604259 383 ntBASIC5.88□□□□□ -1.47
TNNC1P63316 AL356608.1-201ENST00000610034 820 ntBASIC5.88□□□□□ -1.47
TNNC1P63316 FRG1EP-201ENST00000634469 770 ntBASIC5.88□□□□□ -1.47
TNNC1P63316 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.88□□□□□ -1.47
TNNC1P63316 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TNNC1P63316 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TNNC1P63316 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TNNC1P63316 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.88□□□□□ -1.47
TNNC1P63316 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
TNNC1P63316 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TNNC1P63316 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
TNNC1P63316 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TNNC1P63316 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TNNC1P63316 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TNNC1P63316 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.87□□□□□ -1.47
TNNC1P63316 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TNNC1P63316 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
TNNC1P63316 RN7SKP160-201ENST00000363804 340 ntBASIC5.87□□□□□ -1.47
TNNC1P63316 RN7SKP59-201ENST00000410520 314 ntBASIC5.87□□□□□ -1.47
TNNC1P63316 GABARAPL3-201ENST00000412799 354 ntBASIC5.87□□□□□ -1.47
TNNC1P63316 AL590399.4-201ENST00000436561 601 ntBASIC5.87□□□□□ -1.47
TNNC1P63316 SPRYD7P1-201ENST00000443861 570 ntBASIC5.87□□□□□ -1.47
TNNC1P63316 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.87□□□□□ -1.47
TNNC1P63316 EIF3LP3-201ENST00000495197 822 ntBASIC5.87□□□□□ -1.47
TNNC1P63316 RPS26P24-201ENST00000497656 331 ntBASIC5.87□□□□□ -1.47
TNNC1P63316 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.87□□□□□ -1.47
TNNC1P63316 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.87□□□□□ -1.47
TNNC1P63316 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.87□□□□□ -1.47
TNNC1P63316 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.87□□□□□ -1.47
TNNC1P63316 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.87□□□□□ -1.47
TNNC1P63316 RN7SL290P-201ENST00000578661 300 ntBASIC5.87□□□□□ -1.47
TNNC1P63316 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.87□□□□□ -1.47
TNNC1P63316 AC000068.2-201ENST00000608816 460 ntBASIC5.87□□□□□ -1.47
TNNC1P63316 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.87□□□□□ -1.47
TNNC1P63316 AC008833.1-201ENST00000611633 691 ntBASIC5.87□□□□□ -1.47
TNNC1P63316 AC007204.2-201ENST00000615022 616 ntBASIC5.87□□□□□ -1.47
TNNC1P63316 AC005840.5-201ENST00000619166 599 ntBASIC5.87□□□□□ -1.47
TNNC1P63316 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.87□□□□□ -1.47
TNNC1P63316 MTCO1P11-201ENST00000429111 1528 ntBASIC5.87□□□□□ -1.47
TNNC1P63316 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.87□□□□□ -1.47
TNNC1P63316 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
TNNC1P63316 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TNNC1P63316 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TNNC1P63316 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
TNNC1P63316 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TNNC1P63316 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TNNC1P63316 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TNNC1P63316 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
TNNC1P63316 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
TNNC1P63316 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TNNC1P63316 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TNNC1P63316 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TNNC1P63316 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TNNC1P63316 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
TNNC1P63316 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TNNC1P63316 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.86□□□□□ -1.47
TNNC1P63316 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TNNC1P63316 NACAP7-201ENST00000407371 609 ntBASIC5.86□□□□□ -1.47
TNNC1P63316 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms