Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VBP1P61758 AC015524.1-201ENST00000491585 472 ntBASIC4.81□□□□□ -1.64
VBP1P61758 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VBP1P61758 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VBP1P61758 AC113367.2-201ENST00000505749 160 ntBASIC4.81□□□□□ -1.64
VBP1P61758 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.81□□□□□ -1.64
VBP1P61758 BTG4P1-201ENST00000510421 183 ntBASIC4.81□□□□□ -1.64
VBP1P61758 ZNF519P4-201ENST00000514008 125 ntBASIC4.81□□□□□ -1.64
VBP1P61758 RNA5SP303-201ENST00000516192 130 ntBASIC4.81□□□□□ -1.64
VBP1P61758 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC4.81□□□□□ -1.64
VBP1P61758 AC009879.1-201ENST00000520029 839 ntBASIC4.81□□□□□ -1.64
VBP1P61758 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
VBP1P61758 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC4.81□□□□□ -1.64
VBP1P61758 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.81□□□□□ -1.64
VBP1P61758 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.81□□□□□ -1.64
VBP1P61758 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.81□□□□□ -1.64
VBP1P61758 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.81□□□□□ -1.64
VBP1P61758 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.81□□□□□ -1.64
VBP1P61758 AL390877.1-201ENST00000605704 214 ntBASIC4.81□□□□□ -1.64
VBP1P61758 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.81□□□□□ -1.64
VBP1P61758 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.81□□□□□ -1.64
VBP1P61758 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
VBP1P61758 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.81□□□□□ -1.64
VBP1P61758 AL596275.2-207ENST00000641188 675 ntBASIC4.81□□□□□ -1.64
VBP1P61758 AL596275.2-204ENST00000641628 552 ntBASIC4.81□□□□□ -1.64
VBP1P61758 AL596275.2-206ENST00000641957 626 ntBASIC4.81□□□□□ -1.64
VBP1P61758 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.81□□□□□ -1.64
VBP1P61758 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VBP1P61758 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
VBP1P61758 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VBP1P61758 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VBP1P61758 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VBP1P61758 AC007996.1-201ENST00000620414 2821 ntBASIC4.81□□□□□ -1.64
VBP1P61758 LINC01109-201ENST00000603837 3081 ntBASIC4.81□□□□□ -1.64
VBP1P61758 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VBP1P61758 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.8□□□□□ -1.64
VBP1P61758 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
VBP1P61758 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.8□□□□□ -1.64
VBP1P61758 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.8□□□□□ -1.64
VBP1P61758 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
VBP1P61758 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.8□□□□□ -1.64
VBP1P61758 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VBP1P61758 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VBP1P61758 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
VBP1P61758 RNA5SP30-201ENST00000365552 115 ntBASIC4.8□□□□□ -1.64
VBP1P61758 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
VBP1P61758 RPS24P12-201ENST00000402084 394 ntBASIC4.8□□□□□ -1.64
VBP1P61758 PRELID1P1-201ENST00000403549 660 ntBASIC4.8□□□□□ -1.64
VBP1P61758 AL096711.1-201ENST00000404780 554 ntBASIC4.8□□□□□ -1.64
VBP1P61758 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.8□□□□□ -1.64
VBP1P61758 AL161742.1-201ENST00000418154 584 ntBASIC4.8□□□□□ -1.64
VBP1P61758 NENFP1-201ENST00000419476 466 ntBASIC4.8□□□□□ -1.64
VBP1P61758 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC4.8□□□□□ -1.64
VBP1P61758 RPS10P14-201ENST00000440748 502 ntBASIC4.8□□□□□ -1.64
VBP1P61758 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
VBP1P61758 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.8□□□□□ -1.64
VBP1P61758 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC4.8□□□□□ -1.64
VBP1P61758 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.8□□□□□ -1.64
VBP1P61758 GEMIN2P1-201ENST00000454246 752 ntBASIC4.8□□□□□ -1.64
VBP1P61758 AC022795.1-201ENST00000473808 480 ntBASIC4.8□□□□□ -1.64
VBP1P61758 RPS24P16-201ENST00000497294 392 ntBASIC4.8□□□□□ -1.64
VBP1P61758 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC4.8□□□□□ -1.64
VBP1P61758 AC138938.1-201ENST00000515431 782 ntBASIC4.8□□□□□ -1.64
VBP1P61758 AC021678.3-201ENST00000517893 476 ntBASIC4.8□□□□□ -1.64
VBP1P61758 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.8□□□□□ -1.64
VBP1P61758 AP005119.2-201ENST00000579735 1105 ntBASIC4.8□□□□□ -1.64
VBP1P61758 AP005119.1-201ENST00000580956 292 ntBASIC4.8□□□□□ -1.64
VBP1P61758 MIR4260-201ENST00000583107 67 ntBASIC4.8□□□□□ -1.64
VBP1P61758 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC4.8□□□□□ -1.64
VBP1P61758 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC4.8□□□□□ -1.64
VBP1P61758 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC4.8□□□□□ -1.64
VBP1P61758 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.8□□□□□ -1.64
VBP1P61758 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
VBP1P61758 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC4.8□□□□□ -1.64
VBP1P61758 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VBP1P61758 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
VBP1P61758 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VBP1P61758 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VBP1P61758 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VBP1P61758 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VBP1P61758 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VBP1P61758 AC008627.1-201ENST00000517511 1704 ntBASIC4.8□□□□□ -1.64
VBP1P61758 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
VBP1P61758 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
VBP1P61758 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.79□□□□□ -1.64
VBP1P61758 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC4.79□□□□□ -1.64
VBP1P61758 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.79□□□□□ -1.64
VBP1P61758 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
VBP1P61758 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.79□□□□□ -1.64
VBP1P61758 AL162456.1-201ENST00000634535 2006 ntBASIC4.79□□□□□ -1.64
VBP1P61758 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VBP1P61758 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
VBP1P61758 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VBP1P61758 OR10J6P-201ENST00000289731 930 ntBASIC4.79□□□□□ -1.64
VBP1P61758 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VBP1P61758 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VBP1P61758 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
VBP1P61758 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VBP1P61758 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
VBP1P61758 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms