Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC3.89□□□□□ -1.79
CKS1BP61024 CLMN-206ENST00000556441 452 ntTSL 5 BASIC3.89□□□□□ -1.79
CKS1BP61024 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC3.89□□□□□ -1.79
CKS1BP61024 RN7SL66P-201ENST00000582099 264 ntBASIC3.89□□□□□ -1.79
CKS1BP61024 AP005136.2-201ENST00000583253 1049 ntBASIC3.89□□□□□ -1.79
CKS1BP61024 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC3.89□□□□□ -1.79
CKS1BP61024 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC3.89□□□□□ -1.79
CKS1BP61024 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC3.89□□□□□ -1.79
CKS1BP61024 IGKV2OR2-7-201ENST00000604652 304 ntBASIC3.89□□□□□ -1.79
CKS1BP61024 IGKV2OR2-1-201ENST00000605129 304 ntBASIC3.89□□□□□ -1.79
CKS1BP61024 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC3.89□□□□□ -1.79
CKS1BP61024 AC068726.1-201ENST00000610993 341 ntBASIC3.89□□□□□ -1.79
CKS1BP61024 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.89□□□□□ -1.79
CKS1BP61024 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC3.89□□□□□ -1.79
CKS1BP61024 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CKS1BP61024 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CKS1BP61024 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.89□□□□□ -1.79
CKS1BP61024 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC3.89□□□□□ -1.79
CKS1BP61024 FBXL21-201ENST00000297158 1305 ntBASIC3.89□□□□□ -1.79
CKS1BP61024 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CKS1BP61024 AC117409.1-201ENST00000470499 1310 ntBASIC3.89□□□□□ -1.79
CKS1BP61024 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
CKS1BP61024 CR383656.5-201ENST00000547616 1340 ntBASIC3.89□□□□□ -1.79
CKS1BP61024 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CKS1BP61024 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC3.89□□□□□ -1.79
CKS1BP61024 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CKS1BP61024 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
CKS1BP61024 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CKS1BP61024 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.88□□□□□ -1.79
CKS1BP61024 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
CKS1BP61024 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.88□□□□□ -1.79
CKS1BP61024 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CKS1BP61024 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CKS1BP61024 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CKS1BP61024 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC3.88□□□□□ -1.79
CKS1BP61024 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.88□□□□□ -1.79
CKS1BP61024 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CKS1BP61024 KPNA2P2-201ENST00000419546 1489 ntBASIC3.88□□□□□ -1.79
CKS1BP61024 FTX-210ENST00000603037 8347 ntTSL 5 BASIC3.88□□□□□ -1.79
CKS1BP61024 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CKS1BP61024 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
CKS1BP61024 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CKS1BP61024 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CKS1BP61024 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CKS1BP61024 RNA5SP91-201ENST00000390902 119 ntBASIC3.88□□□□□ -1.79
CKS1BP61024 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.88□□□□□ -1.79
CKS1BP61024 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.88□□□□□ -1.79
CKS1BP61024 TMEM183AP1-205ENST00000432739 290 ntBASIC3.88□□□□□ -1.79
CKS1BP61024 DEFA9P-201ENST00000433042 285 ntBASIC3.88□□□□□ -1.79
CKS1BP61024 AL445928.1-201ENST00000435545 222 ntBASIC3.88□□□□□ -1.79
CKS1BP61024 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.88□□□□□ -1.79
CKS1BP61024 HMGN1P32-201ENST00000441744 256 ntBASIC3.88□□□□□ -1.79
CKS1BP61024 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.88□□□□□ -1.79
CKS1BP61024 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC3.88□□□□□ -1.79
CKS1BP61024 CTSLP6-201ENST00000458273 1002 ntBASIC3.88□□□□□ -1.79
CKS1BP61024 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
CKS1BP61024 AC021660.1-201ENST00000465006 554 ntBASIC3.88□□□□□ -1.79
CKS1BP61024 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC3.88□□□□□ -1.79
CKS1BP61024 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC3.88□□□□□ -1.79
CKS1BP61024 RN7SL273P-201ENST00000481561 299 ntBASIC3.88□□□□□ -1.79
CKS1BP61024 PRELID3BP7-201ENST00000503606 469 ntBASIC3.88□□□□□ -1.79
CKS1BP61024 AC105384.2-201ENST00000508433 640 ntBASIC3.88□□□□□ -1.79
CKS1BP61024 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC3.88□□□□□ -1.79
CKS1BP61024 LDHBP3-201ENST00000514909 822 ntBASIC3.88□□□□□ -1.79
CKS1BP61024 GAPDHP62-201ENST00000515313 990 ntBASIC3.88□□□□□ -1.79
CKS1BP61024 Vault.2-201ENST00000516519 98 ntBASIC3.88□□□□□ -1.79
CKS1BP61024 VTA1P2-201ENST00000520205 911 ntBASIC3.88□□□□□ -1.79
CKS1BP61024 AP004607.5-201ENST00000532034 217 ntBASIC3.88□□□□□ -1.79
CKS1BP61024 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC3.88□□□□□ -1.79
CKS1BP61024 SLC25A51P2-201ENST00000535708 889 ntBASIC3.88□□□□□ -1.79
CKS1BP61024 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC3.88□□□□□ -1.79
CKS1BP61024 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC3.88□□□□□ -1.79
CKS1BP61024 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC3.88□□□□□ -1.79
CKS1BP61024 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC3.88□□□□□ -1.79
CKS1BP61024 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC3.88□□□□□ -1.79
CKS1BP61024 AC011891.2-201ENST00000604949 397 ntBASIC3.88□□□□□ -1.79
CKS1BP61024 PACRG-210ENST00000611387 279 ntTSL 5 BASIC3.88□□□□□ -1.79
CKS1BP61024 AC022400.9-201ENST00000623633 273 ntBASIC3.88□□□□□ -1.79
CKS1BP61024 BMPR1APS1-201ENST00000403332 1598 ntBASIC3.88□□□□□ -1.79
CKS1BP61024 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CKS1BP61024 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC3.88□□□□□ -1.79
CKS1BP61024 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC3.88□□□□□ -1.79
CKS1BP61024 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CKS1BP61024 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CKS1BP61024 SALL4P2-201ENST00000423288 2910 ntBASIC3.88□□□□□ -1.79
CKS1BP61024 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
CKS1BP61024 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC3.87□□□□□ -1.79
CKS1BP61024 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CKS1BP61024 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC3.87□□□□□ -1.79
CKS1BP61024 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC3.87□□□□□ -1.79
CKS1BP61024 Z73965.1-201ENST00000623412 2297 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CKS1BP61024 AC007938.2-201ENST00000604666 2634 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CKS1BP61024 MIR365B-201ENST00000362317 111 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 SNORA64.3-201ENST00000365647 134 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CKS1BP61024 RNU1-136P-201ENST00000384181 164 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 ZNF37CP-201ENST00000406795 241 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms