Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC113367.2-201ENST00000505749 160 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 AC095052.1-201ENST00000509955 863 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 PRELID3BP4-201ENST00000515476 571 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.66□□□□□ -1.5
SUMO3P55854 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SUMO3P55854 AP002373.2-201ENST00000541631 1060 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.66□□□□□ -1.5
SUMO3P55854 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SUMO3P55854 AC121758.1-202ENST00000556917 658 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 AL078601.3-201ENST00000573303 535 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.66□□□□□ -1.5
SUMO3P55854 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SUMO3P55854 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.66□□□□□ -1.5
SUMO3P55854 ELOCP35-201ENST00000604289 336 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 Z99289.3-201ENST00000605586 594 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.66□□□□□ -1.5
SUMO3P55854 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
SUMO3P55854 AL591167.1-201ENST00000607321 456 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 AL451049.1-201ENST00000608672 497 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
SUMO3P55854 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.66□□□□□ -1.5
SUMO3P55854 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 AC244100.4-201ENST00000617747 388 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 AC010975.3-201ENST00000618727 978 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 AC096708.4-201ENST00000620563 552 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 AC011330.2-201ENST00000621680 635 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.66□□□□□ -1.5
SUMO3P55854 AC090897.3-201ENST00000636973 1157 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
SUMO3P55854 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SUMO3P55854 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 SSXP3-201ENST00000442971 1300 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SUMO3P55854 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.66□□□□□ -1.5
SUMO3P55854 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.66□□□□□ -1.5
SUMO3P55854 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SUMO3P55854 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SUMO3P55854 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.66□□□□□ -1.5
SUMO3P55854 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SUMO3P55854 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SUMO3P55854 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SUMO3P55854 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
SUMO3P55854 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SUMO3P55854 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SUMO3P55854 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
SUMO3P55854 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SUMO3P55854 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SUMO3P55854 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SUMO3P55854 RNU4-51P-201ENST00000364206 140 ntBASIC5.65□□□□□ -1.5
SUMO3P55854 RNU4-68P-201ENST00000364314 141 ntBASIC5.65□□□□□ -1.5
SUMO3P55854 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SUMO3P55854 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.65□□□□□ -1.5
SUMO3P55854 LINC01881-201ENST00000416103 412 ntBASIC5.65□□□□□ -1.5
SUMO3P55854 RPL22P18-201ENST00000417197 377 ntBASIC5.65□□□□□ -1.5
SUMO3P55854 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.65□□□□□ -1.5
SUMO3P55854 MTCO2P21-201ENST00000419780 677 ntBASIC5.65□□□□□ -1.5
SUMO3P55854 MTND2P16-201ENST00000419987 799 ntBASIC5.65□□□□□ -1.5
SUMO3P55854 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.65□□□□□ -1.5
SUMO3P55854 RPL12P28-201ENST00000430852 489 ntBASIC5.65□□□□□ -1.5
SUMO3P55854 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.65□□□□□ -1.5
SUMO3P55854 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.65□□□□□ -1.5
SUMO3P55854 GAPDHP23-201ENST00000444823 993 ntBASIC5.65□□□□□ -1.5
SUMO3P55854 HMGB3P6-201ENST00000444896 598 ntBASIC5.65□□□□□ -1.5
SUMO3P55854 AC099063.2-201ENST00000446360 662 ntBASIC5.65□□□□□ -1.5
SUMO3P55854 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.65□□□□□ -1.5
SUMO3P55854 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.65□□□□□ -1.5
SUMO3P55854 PTGES3P5-201ENST00000455109 434 ntBASIC5.65□□□□□ -1.5
SUMO3P55854 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.65□□□□□ -1.5
SUMO3P55854 CDC42P1-201ENST00000456658 548 ntBASIC5.65□□□□□ -1.5
SUMO3P55854 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.65□□□□□ -1.5
SUMO3P55854 AC114728.1-201ENST00000488289 483 ntBASIC5.65□□□□□ -1.5
SUMO3P55854 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.65□□□□□ -1.5
SUMO3P55854 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.65□□□□□ -1.5
SUMO3P55854 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.65□□□□□ -1.5
SUMO3P55854 AC104108.1-201ENST00000509930 412 ntBASIC5.65□□□□□ -1.5
SUMO3P55854 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SUMO3P55854 IGKV2D-10-201ENST00000520194 281 ntBASIC5.65□□□□□ -1.5
SUMO3P55854 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.65□□□□□ -1.5
SUMO3P55854 NPIPB14P-203ENST00000532298 987 ntBASIC5.65□□□□□ -1.5
SUMO3P55854 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.65□□□□□ -1.5
SUMO3P55854 AC090115.2-201ENST00000548060 883 ntBASIC5.65□□□□□ -1.5
SUMO3P55854 AC007346.2-201ENST00000564816 892 ntBASIC5.65□□□□□ -1.5
SUMO3P55854 AC009712.1-201ENST00000564938 316 ntBASIC5.65□□□□□ -1.5
SUMO3P55854 LINC00556-201ENST00000569603 412 ntBASIC5.65□□□□□ -1.5
SUMO3P55854 AC138207.8-204ENST00000579588 527 ntBASIC5.65□□□□□ -1.5
SUMO3P55854 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.65□□□□□ -1.5
SUMO3P55854 CCDC58P3-201ENST00000590792 430 ntBASIC5.65□□□□□ -1.5
SUMO3P55854 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.65□□□□□ -1.5
SUMO3P55854 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.65□□□□□ -1.5
SUMO3P55854 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.65□□□□□ -1.5
SUMO3P55854 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.65□□□□□ -1.5
SUMO3P55854 AL035411.2-201ENST00000604022 421 ntBASIC5.65□□□□□ -1.5
SUMO3P55854 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.65□□□□□ -1.5
SUMO3P55854 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.65□□□□□ -1.5
SUMO3P55854 AL121594.5-201ENST00000631724 573 ntBASIC5.65□□□□□ -1.5
SUMO3P55854 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.65□□□□□ -1.51
SUMO3P55854 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.65□□□□□ -1.51
SUMO3P55854 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SUMO3P55854 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms