Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.67□□□□□ -1.5
NR1H2P55055 AGGF1P7-201ENST00000562369 913 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.67□□□□□ -1.5
NR1H2P55055 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NR1H2P55055 RN7SL753P-201ENST00000581238 290 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 AC020916.2-201ENST00000591242 360 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.67□□□□□ -1.5
NR1H2P55055 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.67□□□□□ -1.5
NR1H2P55055 AC007786.3-201ENST00000615154 596 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 MIR6085-201ENST00000618314 110 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.67□□□□□ -1.5
NR1H2P55055 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.67□□□□□ -1.5
NR1H2P55055 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.67□□□□□ -1.5
NR1H2P55055 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.67□□□□□ -1.5
NR1H2P55055 OR7A1P-202ENST00000641542 1158 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
NR1H2P55055 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
NR1H2P55055 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NR1H2P55055 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NR1H2P55055 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
NR1H2P55055 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NR1H2P55055 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NR1H2P55055 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
NR1H2P55055 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NR1H2P55055 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NR1H2P55055 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NR1H2P55055 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NR1H2P55055 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NR1H2P55055 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NR1H2P55055 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NR1H2P55055 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NR1H2P55055 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
NR1H2P55055 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
NR1H2P55055 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NR1H2P55055 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.66□□□□□ -1.5
NR1H2P55055 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NR1H2P55055 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NR1H2P55055 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
NR1H2P55055 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NR1H2P55055 OR9K1P-202ENST00000641111 3217 ntBASIC5.66□□□□□ -1.5
NR1H2P55055 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NR1H2P55055 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NR1H2P55055 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NR1H2P55055 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NR1H2P55055 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
NR1H2P55055 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
NR1H2P55055 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NR1H2P55055 RNU6-249P-201ENST00000363016 102 ntBASIC5.66□□□□□ -1.5
NR1H2P55055 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
NR1H2P55055 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.66□□□□□ -1.5
NR1H2P55055 MIR320B1-201ENST00000390209 79 ntBASIC5.66□□□□□ -1.5
NR1H2P55055 RPL21P50-201ENST00000417698 477 ntBASIC5.66□□□□□ -1.5
NR1H2P55055 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.66□□□□□ -1.5
NR1H2P55055 AC013410.2-201ENST00000422627 201 ntBASIC5.66□□□□□ -1.5
NR1H2P55055 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.66□□□□□ -1.5
NR1H2P55055 AC083862.1-201ENST00000427378 1242 ntBASIC5.66□□□□□ -1.5
NR1H2P55055 EMC3-AS1-205ENST00000438698 534 ntBASIC5.66□□□□□ -1.5
NR1H2P55055 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.66□□□□□ -1.5
NR1H2P55055 AL133351.3-201ENST00000454998 193 ntBASIC5.66□□□□□ -1.5
NR1H2P55055 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
NR1H2P55055 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NR1H2P55055 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.66□□□□□ -1.5
NR1H2P55055 RPSAP51-201ENST00000497462 645 ntBASIC5.66□□□□□ -1.5
NR1H2P55055 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.66□□□□□ -1.5
NR1H2P55055 AC016550.1-201ENST00000505348 785 ntBASIC5.66□□□□□ -1.5
NR1H2P55055 AC090568.1-201ENST00000509499 856 ntBASIC5.66□□□□□ -1.5
NR1H2P55055 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.66□□□□□ -1.5
NR1H2P55055 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.66□□□□□ -1.5
NR1H2P55055 HSD3BP3-201ENST00000514706 994 ntBASIC5.66□□□□□ -1.5
NR1H2P55055 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NR1H2P55055 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.66□□□□□ -1.5
NR1H2P55055 AC113192.3-201ENST00000529152 742 ntBASIC5.66□□□□□ -1.5
NR1H2P55055 TRIM51DP-201ENST00000529746 596 ntBASIC5.66□□□□□ -1.5
NR1H2P55055 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NR1H2P55055 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.66□□□□□ -1.5
NR1H2P55055 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.66□□□□□ -1.5
NR1H2P55055 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.66□□□□□ -1.5
NR1H2P55055 DHFRP1-201ENST00000579682 559 ntBASIC5.66□□□□□ -1.5
NR1H2P55055 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.66□□□□□ -1.5
NR1H2P55055 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.66□□□□□ -1.5
NR1H2P55055 AC006115.2-201ENST00000596823 202 ntBASIC5.66□□□□□ -1.5
NR1H2P55055 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.66□□□□□ -1.5
NR1H2P55055 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.66□□□□□ -1.5
NR1H2P55055 AC120053.1-201ENST00000607706 736 ntBASIC5.66□□□□□ -1.5
NR1H2P55055 AC024933.1-201ENST00000608472 348 ntBASIC5.66□□□□□ -1.5
NR1H2P55055 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.66□□□□□ -1.5
NR1H2P55055 AC022400.9-201ENST00000623633 273 ntBASIC5.66□□□□□ -1.5
NR1H2P55055 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
NR1H2P55055 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.66□□□□□ -1.5
NR1H2P55055 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.66□□□□□ -1.5
NR1H2P55055 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NR1H2P55055 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NR1H2P55055 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
NR1H2P55055 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.66□□□□□ -1.5
NR1H2P55055 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NR1H2P55055 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
NR1H2P55055 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
NR1H2P55055 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NR1H2P55055 AC016583.1-201ENST00000624221 2431 ntBASIC5.66□□□□□ -1.5
NR1H2P55055 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms