Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.51□□□□□ -1.37
TM4SF4P48230 RBMY2QP-201ENST00000429799 1147 ntBASIC6.51□□□□□ -1.37
TM4SF4P48230 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.51□□□□□ -1.37
TM4SF4P48230 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TM4SF4P48230 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC6.51□□□□□ -1.37
TM4SF4P48230 RPS3AP41-201ENST00000462701 778 ntBASIC6.51□□□□□ -1.37
TM4SF4P48230 RN7SL738P-201ENST00000470264 297 ntBASIC6.51□□□□□ -1.37
TM4SF4P48230 AC021146.7-201ENST00000509604 775 ntBASIC6.51□□□□□ -1.37
TM4SF4P48230 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.51□□□□□ -1.37
TM4SF4P48230 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.51□□□□□ -1.37
TM4SF4P48230 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.51□□□□□ -1.37
TM4SF4P48230 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.51□□□□□ -1.37
TM4SF4P48230 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.51□□□□□ -1.37
TM4SF4P48230 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.51□□□□□ -1.37
TM4SF4P48230 AC135178.6-201ENST00000605314 398 ntBASIC6.51□□□□□ -1.37
TM4SF4P48230 AC092953.2-201ENST00000608000 699 ntBASIC6.51□□□□□ -1.37
TM4SF4P48230 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.51□□□□□ -1.37
TM4SF4P48230 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.51□□□□□ -1.37
TM4SF4P48230 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
TM4SF4P48230 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
TM4SF4P48230 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
TM4SF4P48230 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TM4SF4P48230 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.51□□□□□ -1.37
TM4SF4P48230 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
TM4SF4P48230 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TM4SF4P48230 AL359195.2-201ENST00000623657 4412 ntBASIC6.51□□□□□ -1.37
TM4SF4P48230 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TM4SF4P48230 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.51□□□□□ -1.37
TM4SF4P48230 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
TM4SF4P48230 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TM4SF4P48230 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
TM4SF4P48230 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
TM4SF4P48230 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TM4SF4P48230 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TM4SF4P48230 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
TM4SF4P48230 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.5□□□□□ -1.37
TM4SF4P48230 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
TM4SF4P48230 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.5□□□□□ -1.37
TM4SF4P48230 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TM4SF4P48230 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TM4SF4P48230 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TM4SF4P48230 RNU6-650P-201ENST00000365658 111 ntBASIC6.5□□□□□ -1.37
TM4SF4P48230 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
TM4SF4P48230 CHMP1B2P-201ENST00000399581 597 ntBASIC6.5□□□□□ -1.37
TM4SF4P48230 PTGES3P2-201ENST00000407942 482 ntBASIC6.5□□□□□ -1.37
TM4SF4P48230 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.5□□□□□ -1.37
TM4SF4P48230 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.5□□□□□ -1.37
TM4SF4P48230 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
TM4SF4P48230 AC093655.2-201ENST00000425735 631 ntBASIC6.5□□□□□ -1.37
TM4SF4P48230 AC104837.2-201ENST00000427236 424 ntBASIC6.5□□□□□ -1.37
TM4SF4P48230 AL360081.1-201ENST00000428299 555 ntBASIC6.5□□□□□ -1.37
TM4SF4P48230 USP9YP9-201ENST00000429406 715 ntBASIC6.5□□□□□ -1.37
TM4SF4P48230 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TM4SF4P48230 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.5□□□□□ -1.37
TM4SF4P48230 AL158053.1-201ENST00000441503 453 ntBASIC6.5□□□□□ -1.37
TM4SF4P48230 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.5□□□□□ -1.37
TM4SF4P48230 AL451063.1-201ENST00000450164 1133 ntBASIC6.5□□□□□ -1.37
TM4SF4P48230 RNU1-88P-201ENST00000459274 128 ntBASIC6.5□□□□□ -1.37
TM4SF4P48230 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.5□□□□□ -1.37
TM4SF4P48230 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TM4SF4P48230 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.5□□□□□ -1.37
TM4SF4P48230 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.5□□□□□ -1.37
TM4SF4P48230 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC6.5□□□□□ -1.37
TM4SF4P48230 AC113192.3-201ENST00000529152 742 ntBASIC6.5□□□□□ -1.37
TM4SF4P48230 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC6.5□□□□□ -1.37
TM4SF4P48230 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.5□□□□□ -1.37
TM4SF4P48230 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.5□□□□□ -1.37
TM4SF4P48230 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TM4SF4P48230 DNAJC19P3-201ENST00000594491 331 ntBASIC6.5□□□□□ -1.37
TM4SF4P48230 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.5□□□□□ -1.37
TM4SF4P48230 ZNF92P2-201ENST00000600543 1059 ntBASIC6.5□□□□□ -1.37
TM4SF4P48230 MTCO3P22-201ENST00000603219 784 ntBASIC6.5□□□□□ -1.37
TM4SF4P48230 MTATP6P2-201ENST00000603319 678 ntBASIC6.5□□□□□ -1.37
TM4SF4P48230 AC095055.1-201ENST00000603472 1113 ntBASIC6.5□□□□□ -1.37
TM4SF4P48230 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.5□□□□□ -1.37
TM4SF4P48230 AP006248.3-201ENST00000623580 594 ntBASIC6.5□□□□□ -1.37
TM4SF4P48230 AC092159.4-201ENST00000624944 550 ntBASIC6.5□□□□□ -1.37
TM4SF4P48230 AL353662.3-201ENST00000625131 237 ntBASIC6.5□□□□□ -1.37
TM4SF4P48230 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
TM4SF4P48230 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TM4SF4P48230 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TM4SF4P48230 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC6.5□□□□□ -1.37
TM4SF4P48230 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
TM4SF4P48230 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TM4SF4P48230 AF131215.2-201ENST00000531549 1710 ntBASIC6.5□□□□□ -1.37
TM4SF4P48230 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.5□□□□□ -1.37
TM4SF4P48230 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TM4SF4P48230 AC130304.1-201ENST00000622942 2385 ntBASIC6.5□□□□□ -1.37
TM4SF4P48230 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TM4SF4P48230 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TM4SF4P48230 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
TM4SF4P48230 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TM4SF4P48230 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.49□□□□□ -1.37
TM4SF4P48230 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TM4SF4P48230 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
TM4SF4P48230 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.49□□□□□ -1.37
TM4SF4P48230 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
TM4SF4P48230 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TM4SF4P48230 AC132825.1-201ENST00000463573 2247 ntBASIC6.49□□□□□ -1.37
TM4SF4P48230 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms