Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AL359513.1-201ENST00000614364 557 ntBASIC6.27□□□□□ -1.41
CIITAP33076 AC241377.1-201ENST00000619797 406 ntBASIC6.27□□□□□ -1.41
CIITAP33076 AL355480.1-201ENST00000629041 99 ntBASIC6.27□□□□□ -1.41
CIITAP33076 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CIITAP33076 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.27□□□□□ -1.41
CIITAP33076 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.27□□□□□ -1.41
CIITAP33076 CASC19-248ENST00000641674 1356 ntBASIC6.27□□□□□ -1.41
CIITAP33076 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CIITAP33076 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CIITAP33076 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.26□□□□□ -1.41
CIITAP33076 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CIITAP33076 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CIITAP33076 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CIITAP33076 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CIITAP33076 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.26□□□□□ -1.41
CIITAP33076 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.26□□□□□ -1.41
CIITAP33076 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CIITAP33076 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.26□□□□□ -1.41
CIITAP33076 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CIITAP33076 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CIITAP33076 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.26□□□□□ -1.41
CIITAP33076 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.26□□□□□ -1.41
CIITAP33076 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.26□□□□□ -1.41
CIITAP33076 SEPT7P6-201ENST00000469999 1143 ntBASIC6.26□□□□□ -1.41
CIITAP33076 AC100832.1-201ENST00000471945 383 ntBASIC6.26□□□□□ -1.41
CIITAP33076 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC6.26□□□□□ -1.41
CIITAP33076 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CIITAP33076 AC108693.1-201ENST00000496068 432 ntBASIC6.26□□□□□ -1.41
CIITAP33076 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CIITAP33076 AC112206.4-201ENST00000515142 405 ntBASIC6.26□□□□□ -1.41
CIITAP33076 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.26□□□□□ -1.41
CIITAP33076 IGKV2-18-201ENST00000522607 343 ntBASIC6.26□□□□□ -1.41
CIITAP33076 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC6.26□□□□□ -1.41
CIITAP33076 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.26□□□□□ -1.41
CIITAP33076 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.26□□□□□ -1.41
CIITAP33076 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.26□□□□□ -1.41
CIITAP33076 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
CIITAP33076 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.26□□□□□ -1.41
CIITAP33076 AC018809.2-201ENST00000602436 3823 ntBASIC6.26□□□□□ -1.41
CIITAP33076 AC022467.1-201ENST00000614738 749 ntBASIC6.26□□□□□ -1.41
CIITAP33076 AL031658.2-201ENST00000616850 651 ntBASIC6.26□□□□□ -1.41
CIITAP33076 MIR8080-201ENST00000622224 89 ntBASIC6.26□□□□□ -1.41
CIITAP33076 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CIITAP33076 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.26□□□□□ -1.41
CIITAP33076 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CIITAP33076 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CIITAP33076 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CIITAP33076 AL355488.2-201ENST00000609909 2850 ntBASIC6.26□□□□□ -1.41
CIITAP33076 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.26□□□□□ -1.41
CIITAP33076 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CIITAP33076 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CIITAP33076 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.26□□□□□ -1.41
CIITAP33076 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.26□□□□□ -1.41
CIITAP33076 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CIITAP33076 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CIITAP33076 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CIITAP33076 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.25□□□□□ -1.41
CIITAP33076 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CIITAP33076 RNA5SP319-201ENST00000362768 119 ntBASIC6.25□□□□□ -1.41
CIITAP33076 Y_RNA.110-201ENST00000363220 99 ntBASIC6.25□□□□□ -1.41
CIITAP33076 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CIITAP33076 RNU6-891P-201ENST00000384280 111 ntBASIC6.25□□□□□ -1.41
CIITAP33076 MIR323B-201ENST00000385269 82 ntBASIC6.25□□□□□ -1.41
CIITAP33076 AL589994.1-201ENST00000404962 340 ntBASIC6.25□□□□□ -1.41
CIITAP33076 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.25□□□□□ -1.41
CIITAP33076 RPL12P43-201ENST00000420608 499 ntBASIC6.25□□□□□ -1.41
CIITAP33076 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.25□□□□□ -1.41
CIITAP33076 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.25□□□□□ -1.41
CIITAP33076 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.25□□□□□ -1.41
CIITAP33076 LINC02210-201ENST00000444561 288 ntBASIC6.25□□□□□ -1.41
CIITAP33076 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.25□□□□□ -1.41
CIITAP33076 AC025181.1-201ENST00000477507 416 ntBASIC6.25□□□□□ -1.41
CIITAP33076 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.25□□□□□ -1.41
CIITAP33076 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.25□□□□□ -1.41
CIITAP33076 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CIITAP33076 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.25□□□□□ -1.41
CIITAP33076 AC000068.2-201ENST00000608816 460 ntBASIC6.25□□□□□ -1.41
CIITAP33076 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.25□□□□□ -1.41
CIITAP33076 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CIITAP33076 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.25□□□□□ -1.41
CIITAP33076 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CIITAP33076 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CIITAP33076 DDX18P6-201ENST00000450119 1997 ntBASIC6.25□□□□□ -1.41
CIITAP33076 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CIITAP33076 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.25□□□□□ -1.41
CIITAP33076 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CIITAP33076 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CIITAP33076 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CIITAP33076 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CIITAP33076 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CIITAP33076 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CIITAP33076 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.24□□□□□ -1.41
CIITAP33076 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CIITAP33076 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CIITAP33076 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CIITAP33076 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CIITAP33076 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CIITAP33076 SNORA51.1-201ENST00000363243 140 ntBASIC6.24□□□□□ -1.41
CIITAP33076 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CIITAP33076 RNU6-1176P-201ENST00000390955 107 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms