Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RNA5SP362-201ENST00000516048 118 ntBASIC5.02□□□□□ -1.61
SHC1P29353 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.02□□□□□ -1.61
SHC1P29353 AL359219.2-201ENST00000555184 348 ntBASIC5.02□□□□□ -1.61
SHC1P29353 AC022404.1-201ENST00000555320 273 ntBASIC5.02□□□□□ -1.61
SHC1P29353 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.02□□□□□ -1.61
SHC1P29353 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.02□□□□□ -1.61
SHC1P29353 RBM22P12-201ENST00000567098 1255 ntBASIC5.02□□□□□ -1.61
SHC1P29353 AC012146.2-201ENST00000576545 416 ntBASIC5.02□□□□□ -1.61
SHC1P29353 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SHC1P29353 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SHC1P29353 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.02□□□□□ -1.61
SHC1P29353 AC010503.3-201ENST00000594355 540 ntBASIC5.02□□□□□ -1.61
SHC1P29353 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SHC1P29353 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.02□□□□□ -1.61
SHC1P29353 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.02□□□□□ -1.61
SHC1P29353 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.02□□□□□ -1.61
SHC1P29353 AC092953.2-201ENST00000608000 699 ntBASIC5.02□□□□□ -1.61
SHC1P29353 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.02□□□□□ -1.61
SHC1P29353 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.02□□□□□ -1.61
SHC1P29353 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.02□□□□□ -1.61
SHC1P29353 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SHC1P29353 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHC1P29353 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHC1P29353 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SHC1P29353 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
SHC1P29353 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHC1P29353 AC006206.1-201ENST00000544842 3387 ntBASIC5.02□□□□□ -1.61
SHC1P29353 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHC1P29353 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
SHC1P29353 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SHC1P29353 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.01□□□□□ -1.61
SHC1P29353 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SHC1P29353 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SHC1P29353 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SHC1P29353 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SHC1P29353 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHC1P29353 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SHC1P29353 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHC1P29353 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.01□□□□□ -1.61
SHC1P29353 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHC1P29353 AC092681.1-201ENST00000297369 291 ntBASIC5.01□□□□□ -1.61
SHC1P29353 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SHC1P29353 AL009179.1-201ENST00000406085 265 ntBASIC5.01□□□□□ -1.61
SHC1P29353 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.01□□□□□ -1.61
SHC1P29353 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.01□□□□□ -1.61
SHC1P29353 AL513325.1-201ENST00000417716 1034 ntBASIC5.01□□□□□ -1.61
SHC1P29353 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHC1P29353 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.01□□□□□ -1.61
SHC1P29353 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5.01□□□□□ -1.61
SHC1P29353 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SHC1P29353 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.01□□□□□ -1.61
SHC1P29353 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.01□□□□□ -1.61
SHC1P29353 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.01□□□□□ -1.61
SHC1P29353 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.01□□□□□ -1.61
SHC1P29353 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.01□□□□□ -1.61
SHC1P29353 RANP1-206ENST00000455094 651 ntBASIC5.01□□□□□ -1.61
SHC1P29353 LDHBP2-201ENST00000456969 1005 ntBASIC5.01□□□□□ -1.61
SHC1P29353 RPSAP39-201ENST00000467439 883 ntBASIC5.01□□□□□ -1.61
SHC1P29353 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.01□□□□□ -1.61
SHC1P29353 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.01□□□□□ -1.61
SHC1P29353 MORF4L2P1-201ENST00000503761 858 ntBASIC5.01□□□□□ -1.61
SHC1P29353 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SHC1P29353 RNU6-1334P-201ENST00000516032 105 ntBASIC5.01□□□□□ -1.61
SHC1P29353 TMEM97P2-201ENST00000517841 403 ntBASIC5.01□□□□□ -1.61
SHC1P29353 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.01□□□□□ -1.61
SHC1P29353 PMS2P3-207ENST00000529061 717 ntBASIC5.01□□□□□ -1.61
SHC1P29353 AC006518.1-201ENST00000541449 943 ntBASIC5.01□□□□□ -1.61
SHC1P29353 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SHC1P29353 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.01□□□□□ -1.61
SHC1P29353 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.01□□□□□ -1.61
SHC1P29353 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.01□□□□□ -1.61
SHC1P29353 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.01□□□□□ -1.61
SHC1P29353 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.01□□□□□ -1.61
SHC1P29353 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.01□□□□□ -1.61
SHC1P29353 AL139124.1-201ENST00000609123 421 ntBASIC5.01□□□□□ -1.61
SHC1P29353 AL118522.2-201ENST00000616045 615 ntBASIC5.01□□□□□ -1.61
SHC1P29353 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.01□□□□□ -1.61
SHC1P29353 AP003072.5-201ENST00000623872 773 ntBASIC5.01□□□□□ -1.61
SHC1P29353 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.01□□□□□ -1.61
SHC1P29353 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.01□□□□□ -1.61
SHC1P29353 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
SHC1P29353 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.01□□□□□ -1.61
SHC1P29353 AL442128.2-201ENST00000620246 1824 ntBASIC5.01□□□□□ -1.61
SHC1P29353 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
SHC1P29353 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SHC1P29353 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.01□□□□□ -1.61
SHC1P29353 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.01□□□□□ -1.61
SHC1P29353 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHC1P29353 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SHC1P29353 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
SHC1P29353 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHC1P29353 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHC1P29353 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5□□□□□ -1.61
SHC1P29353 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
SHC1P29353 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHC1P29353 OR4F13P-202ENST00000560066 2054 ntBASIC5□□□□□ -1.61
SHC1P29353 TET1P1-201ENST00000426627 2301 ntBASIC5□□□□□ -1.61
SHC1P29353 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SHC1P29353 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHC1P29353 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms