Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CD28P10747 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CD28P10747 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.3□□□□□ -1.72
CD28P10747 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC4.3□□□□□ -1.72
CD28P10747 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.3□□□□□ -1.72
CD28P10747 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.3□□□□□ -1.72
CD28P10747 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CD28P10747 DHFRP1-201ENST00000579682 559 ntBASIC4.3□□□□□ -1.72
CD28P10747 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.3□□□□□ -1.72
CD28P10747 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.3□□□□□ -1.72
CD28P10747 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
CD28P10747 AC006115.2-201ENST00000596823 202 ntBASIC4.3□□□□□ -1.72
CD28P10747 AC125494.2-201ENST00000602431 657 ntBASIC4.3□□□□□ -1.72
CD28P10747 HIRAP1-201ENST00000605318 787 ntBASIC4.3□□□□□ -1.72
CD28P10747 AL445222.1-201ENST00000607259 628 ntBASIC4.3□□□□□ -1.72
CD28P10747 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.3□□□□□ -1.72
CD28P10747 AL121612.2-201ENST00000612261 482 ntBASIC4.3□□□□□ -1.72
CD28P10747 AF117829.2-201ENST00000619538 361 ntBASIC4.3□□□□□ -1.72
CD28P10747 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.3□□□□□ -1.72
CD28P10747 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.3□□□□□ -1.72
CD28P10747 OR52B5P-202ENST00000641118 1110 ntBASIC4.3□□□□□ -1.72
CD28P10747 CASC19-222ENST00000641321 1173 ntBASIC4.3□□□□□ -1.72
CD28P10747 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CD28P10747 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CD28P10747 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CD28P10747 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC4.3□□□□□ -1.72
CD28P10747 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CD28P10747 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CD28P10747 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CD28P10747 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CD28P10747 MTCO1P46-201ENST00000451639 1491 ntBASIC4.3□□□□□ -1.72
CD28P10747 AC007342.5-201ENST00000571340 2142 ntBASIC4.3□□□□□ -1.72
CD28P10747 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CD28P10747 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CD28P10747 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.29□□□□□ -1.72
CD28P10747 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.29□□□□□ -1.72
CD28P10747 AC073429.2-201ENST00000569694 1444 ntBASIC4.29□□□□□ -1.72
CD28P10747 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CD28P10747 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CD28P10747 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.29□□□□□ -1.72
CD28P10747 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CD28P10747 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CD28P10747 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CD28P10747 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.29□□□□□ -1.72
CD28P10747 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CD28P10747 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CD28P10747 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CD28P10747 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CD28P10747 RNA5SP183-201ENST00000362452 119 ntBASIC4.29□□□□□ -1.72
CD28P10747 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CD28P10747 SNORA16A-201ENST00000384342 137 ntBASIC4.29□□□□□ -1.72
CD28P10747 AC096921.1-201ENST00000411661 375 ntBASIC4.29□□□□□ -1.72
CD28P10747 METTL15P3-201ENST00000415522 1221 ntBASIC4.29□□□□□ -1.72
CD28P10747 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.29□□□□□ -1.72
CD28P10747 TMEM183AP1-205ENST00000432739 290 ntBASIC4.29□□□□□ -1.72
CD28P10747 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.29□□□□□ -1.72
CD28P10747 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.29□□□□□ -1.72
CD28P10747 RSU1P1-201ENST00000453416 441 ntBASIC4.29□□□□□ -1.72
CD28P10747 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.29□□□□□ -1.72
CD28P10747 RN7SL826P-201ENST00000479724 288 ntBASIC4.29□□□□□ -1.72
CD28P10747 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CD28P10747 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.29□□□□□ -1.72
CD28P10747 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.29□□□□□ -1.72
CD28P10747 RNU6-1334P-201ENST00000516032 105 ntBASIC4.29□□□□□ -1.72
CD28P10747 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.29□□□□□ -1.72
CD28P10747 AP006245.2-201ENST00000522004 300 ntBASIC4.29□□□□□ -1.72
CD28P10747 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.29□□□□□ -1.72
CD28P10747 HMGN2P6-201ENST00000551091 273 ntBASIC4.29□□□□□ -1.72
CD28P10747 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.29□□□□□ -1.72
CD28P10747 AC106730.2-201ENST00000566641 540 ntBASIC4.29□□□□□ -1.72
CD28P10747 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.29□□□□□ -1.72
CD28P10747 AL163952.1-202ENST00000569625 600 ntBASIC4.29□□□□□ -1.72
CD28P10747 RBM22P1-201ENST00000578589 1214 ntBASIC4.29□□□□□ -1.72
CD28P10747 AP005403.1-201ENST00000579720 229 ntBASIC4.29□□□□□ -1.72
CD28P10747 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.29□□□□□ -1.72
CD28P10747 AC126915.2-201ENST00000610957 190 ntBASIC4.29□□□□□ -1.72
CD28P10747 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.29□□□□□ -1.72
CD28P10747 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CD28P10747 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CD28P10747 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.29□□□□□ -1.72
CD28P10747 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CD28P10747 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CD28P10747 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.29□□□□□ -1.72
CD28P10747 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CD28P10747 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.29□□□□□ -1.72
CD28P10747 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CD28P10747 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CD28P10747 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CD28P10747 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CD28P10747 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CD28P10747 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CD28P10747 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CD28P10747 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CD28P10747 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CD28P10747 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CD28P10747 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CD28P10747 MIR133B-201ENST00000362210 119 ntBASIC4.28□□□□□ -1.72
CD28P10747 RNA5SP326-201ENST00000363209 110 ntBASIC4.28□□□□□ -1.72
CD28P10747 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CD28P10747 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms