Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC4P09017 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC4P09017 RN7SKP17-201ENST00000411242 351 ntBASIC5.32□□□□□ -1.56
HOXC4P09017 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXC4P09017 AL354766.1-201ENST00000423396 542 ntBASIC5.32□□□□□ -1.56
HOXC4P09017 AC245047.2-201ENST00000441060 530 ntBASIC5.32□□□□□ -1.56
HOXC4P09017 EEF1B2P5-201ENST00000444820 548 ntBASIC5.32□□□□□ -1.56
HOXC4P09017 AC073072.2-201ENST00000447425 348 ntBASIC5.32□□□□□ -1.56
HOXC4P09017 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXC4P09017 AC092754.1-201ENST00000472975 479 ntBASIC5.32□□□□□ -1.56
HOXC4P09017 RN7SL222P-201ENST00000476452 299 ntBASIC5.32□□□□□ -1.56
HOXC4P09017 RPL7P40-201ENST00000481703 745 ntBASIC5.32□□□□□ -1.56
HOXC4P09017 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXC4P09017 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.32□□□□□ -1.56
HOXC4P09017 SNRPCP2-201ENST00000504370 475 ntBASIC5.32□□□□□ -1.56
HOXC4P09017 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXC4P09017 RNU6-941P-201ENST00000516346 108 ntBASIC5.32□□□□□ -1.56
HOXC4P09017 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXC4P09017 OR4A17P-201ENST00000526032 904 ntBASIC5.32□□□□□ -1.56
HOXC4P09017 AC022832.1-201ENST00000530718 645 ntBASIC5.32□□□□□ -1.56
HOXC4P09017 AP004607.2-201ENST00000533949 322 ntBASIC5.32□□□□□ -1.56
HOXC4P09017 YWHABP2-201ENST00000540201 713 ntBASIC5.32□□□□□ -1.56
HOXC4P09017 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXC4P09017 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXC4P09017 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
HOXC4P09017 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXC4P09017 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC4P09017 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXC4P09017 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HOXC4P09017 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC4P09017 BX323046.1-201ENST00000610145 535 ntBASIC5.32□□□□□ -1.56
HOXC4P09017 AC126915.2-201ENST00000610957 190 ntBASIC5.32□□□□□ -1.56
HOXC4P09017 MIR6719-201ENST00000622428 87 ntBASIC5.32□□□□□ -1.56
HOXC4P09017 AC005618.4-201ENST00000625053 554 ntBASIC5.32□□□□□ -1.56
HOXC4P09017 AC079776.5-201ENST00000641920 211 ntBASIC5.32□□□□□ -1.56
HOXC4P09017 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC4P09017 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
HOXC4P09017 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC4P09017 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC4P09017 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC4P09017 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXC4P09017 AC011933.2-201ENST00000578539 2790 ntBASIC5.32□□□□□ -1.56
HOXC4P09017 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC4P09017 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC4P09017 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC4P09017 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC4P09017 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC4P09017 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC4P09017 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC4P09017 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
HOXC4P09017 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC4P09017 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC4P09017 C4BPAP1-201ENST00000415474 1893 ntBASIC5.31□□□□□ -1.56
HOXC4P09017 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HOXC4P09017 U3.2-201ENST00000362981 210 ntBASIC5.31□□□□□ -1.56
HOXC4P09017 RNU1-19P-201ENST00000363306 165 ntBASIC5.31□□□□□ -1.56
HOXC4P09017 RNU1-149P-201ENST00000390870 161 ntBASIC5.31□□□□□ -1.56
HOXC4P09017 AL354868.1-201ENST00000417077 482 ntBASIC5.31□□□□□ -1.56
HOXC4P09017 VTI1BP4-201ENST00000427516 527 ntBASIC5.31□□□□□ -1.56
HOXC4P09017 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXC4P09017 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXC4P09017 AC073465.2-201ENST00000440938 498 ntBASIC5.31□□□□□ -1.56
HOXC4P09017 AL389915.2-201ENST00000454576 441 ntBASIC5.31□□□□□ -1.56
HOXC4P09017 AC005532.2-201ENST00000467154 373 ntBASIC5.31□□□□□ -1.56
HOXC4P09017 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXC4P09017 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXC4P09017 AC125612.1-201ENST00000547580 377 ntBASIC5.31□□□□□ -1.56
HOXC4P09017 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXC4P09017 RPL10P14-201ENST00000565265 298 ntBASIC5.31□□□□□ -1.56
HOXC4P09017 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXC4P09017 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXC4P09017 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXC4P09017 AC211433.2-201ENST00000608433 387 ntBASIC5.31□□□□□ -1.56
HOXC4P09017 AL121612.2-201ENST00000612261 482 ntBASIC5.31□□□□□ -1.56
HOXC4P09017 AL139407.1-201ENST00000613826 1175 ntBASIC5.31□□□□□ -1.56
HOXC4P09017 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC4P09017 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXC4P09017 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXC4P09017 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC4P09017 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXC4P09017 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXC4P09017 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
HOXC4P09017 AC144833.1-201ENST00000567953 4089 ntBASIC5.31□□□□□ -1.56
HOXC4P09017 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
HOXC4P09017 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC4P09017 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
HOXC4P09017 OR4G1P-202ENST00000641173 1788 ntBASIC5.31□□□□□ -1.56
HOXC4P09017 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXC4P09017 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC4P09017 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HOXC4P09017 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC4P09017 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXC4P09017 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC4P09017 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
HOXC4P09017 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.3□□□□□ -1.56
HOXC4P09017 AC079097.1-201ENST00000512187 1399 ntBASIC5.3□□□□□ -1.56
HOXC4P09017 AL359715.3-201ENST00000569267 2123 ntBASIC5.3□□□□□ -1.56
HOXC4P09017 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HOXC4P09017 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXC4P09017 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms