Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RETP07949 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RETP07949 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
RETP07949 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.67□□□□□ -1.5
RETP07949 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
RETP07949 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.67□□□□□ -1.5
RETP07949 MIR133A2-201ENST00000347538 102 ntBASIC5.67□□□□□ -1.5
RETP07949 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RETP07949 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.67□□□□□ -1.5
RETP07949 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.67□□□□□ -1.5
RETP07949 AC019205.1-201ENST00000421830 730 ntBASIC5.67□□□□□ -1.5
RETP07949 BX276092.6-201ENST00000430476 250 ntBASIC5.67□□□□□ -1.5
RETP07949 GSTA7P-201ENST00000438425 448 ntBASIC5.67□□□□□ -1.5
RETP07949 RPS11P7-201ENST00000442125 465 ntBASIC5.67□□□□□ -1.5
RETP07949 AC019185.1-201ENST00000442718 389 ntBASIC5.67□□□□□ -1.5
RETP07949 CEACAMP9-201ENST00000442990 513 ntBASIC5.67□□□□□ -1.5
RETP07949 SDC4P-201ENST00000453285 601 ntBASIC5.67□□□□□ -1.5
RETP07949 BX276092.8-201ENST00000455722 250 ntBASIC5.67□□□□□ -1.5
RETP07949 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.67□□□□□ -1.5
RETP07949 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.67□□□□□ -1.5
RETP07949 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.67□□□□□ -1.5
RETP07949 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.67□□□□□ -1.5
RETP07949 OR8G3P-201ENST00000533406 921 ntBASIC5.67□□□□□ -1.5
RETP07949 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.67□□□□□ -1.5
RETP07949 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.67□□□□□ -1.5
RETP07949 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.67□□□□□ -1.5
RETP07949 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.67□□□□□ -1.5
RETP07949 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.67□□□□□ -1.5
RETP07949 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.67□□□□□ -1.5
RETP07949 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.67□□□□□ -1.5
RETP07949 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.67□□□□□ -1.5
RETP07949 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.67□□□□□ -1.5
RETP07949 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.67□□□□□ -1.5
RETP07949 RNA5SP439-201ENST00000617595 124 ntBASIC5.67□□□□□ -1.5
RETP07949 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RETP07949 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
RETP07949 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RETP07949 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.67□□□□□ -1.5
RETP07949 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.67□□□□□ -1.5
RETP07949 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RETP07949 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
RETP07949 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RETP07949 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RETP07949 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
RETP07949 AC130304.1-201ENST00000622942 2385 ntBASIC5.66□□□□□ -1.5
RETP07949 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
RETP07949 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RETP07949 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
RETP07949 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.66□□□□□ -1.5
RETP07949 CASC19-260ENST00000641828 2001 ntBASIC5.66□□□□□ -1.5
RETP07949 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RETP07949 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
RETP07949 AL035419.1-201ENST00000397037 564 ntBASIC5.66□□□□□ -1.5
RETP07949 AL390774.1-201ENST00000411924 246 ntBASIC5.66□□□□□ -1.5
RETP07949 AC016397.1-201ENST00000412463 242 ntBASIC5.66□□□□□ -1.5
RETP07949 GABARAPL3-201ENST00000412799 354 ntBASIC5.66□□□□□ -1.5
RETP07949 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.66□□□□□ -1.5
RETP07949 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.66□□□□□ -1.5
RETP07949 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.66□□□□□ -1.5
RETP07949 RPS26P41-201ENST00000450370 284 ntBASIC5.66□□□□□ -1.5
RETP07949 SEPT7P3-201ENST00000455017 621 ntBASIC5.66□□□□□ -1.5
RETP07949 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.66□□□□□ -1.5
RETP07949 AC079080.1-201ENST00000479841 822 ntBASIC5.66□□□□□ -1.5
RETP07949 RN7SKP288-201ENST00000516227 268 ntBASIC5.66□□□□□ -1.5
RETP07949 OR8Q1P-201ENST00000526467 655 ntBASIC5.66□□□□□ -1.5
RETP07949 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.66□□□□□ -1.5
RETP07949 AC126177.5-201ENST00000549599 178 ntBASIC5.66□□□□□ -1.5
RETP07949 AC007346.2-201ENST00000564816 892 ntBASIC5.66□□□□□ -1.5
RETP07949 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.66□□□□□ -1.5
RETP07949 AC006363.1-201ENST00000603806 463 ntBASIC5.66□□□□□ -1.5
RETP07949 uc_338.26-201ENST00000612659 160 ntBASIC5.66□□□□□ -1.5
RETP07949 AL445528.2-201ENST00000620582 470 ntBASIC5.66□□□□□ -1.5
RETP07949 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.66□□□□□ -1.5
RETP07949 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RETP07949 HSPA8P14-201ENST00000552265 1805 ntBASIC5.66□□□□□ -1.5
RETP07949 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.66□□□□□ -1.5
RETP07949 SAMM50P1-201ENST00000455403 1399 ntBASIC5.66□□□□□ -1.5
RETP07949 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RETP07949 AC004076.2-201ENST00000620532 3323 ntBASIC5.66□□□□□ -1.5
RETP07949 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RETP07949 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
RETP07949 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RETP07949 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
RETP07949 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RETP07949 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.65□□□□□ -1.5
RETP07949 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RETP07949 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RETP07949 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RETP07949 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RETP07949 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.65□□□□□ -1.5
RETP07949 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.65□□□□□ -1.5
RETP07949 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
RETP07949 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RETP07949 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.65□□□□□ -1.5
RETP07949 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
RETP07949 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RETP07949 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RETP07949 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
RETP07949 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RETP07949 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms