Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.01□□□□□ -1.45
RB1P06400 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.01□□□□□ -1.45
RB1P06400 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.01□□□□□ -1.45
RB1P06400 HIGD1AP5-201ENST00000529959 259 ntBASIC6.01□□□□□ -1.45
RB1P06400 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
RB1P06400 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC6.01□□□□□ -1.45
RB1P06400 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.01□□□□□ -1.45
RB1P06400 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC6.01□□□□□ -1.45
RB1P06400 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.01□□□□□ -1.45
RB1P06400 MIR132-201ENST00000591554 101 ntBASIC6.01□□□□□ -1.45
RB1P06400 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.01□□□□□ -1.45
RB1P06400 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC6.01□□□□□ -1.45
RB1P06400 MIR6820-201ENST00000611508 62 ntBASIC6.01□□□□□ -1.45
RB1P06400 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RB1P06400 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RB1P06400 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
RB1P06400 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.01□□□□□ -1.45
RB1P06400 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RB1P06400 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
RB1P06400 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RB1P06400 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
RB1P06400 FBXL21-201ENST00000297158 1305 ntBASIC6□□□□□ -1.45
RB1P06400 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
RB1P06400 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6□□□□□ -1.45
RB1P06400 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6□□□□□ -1.45
RB1P06400 AP004607.3-201ENST00000530354 3915 ntBASIC6□□□□□ -1.45
RB1P06400 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6□□□□□ -1.45
RB1P06400 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RB1P06400 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RB1P06400 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6□□□□□ -1.45
RB1P06400 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6□□□□□ -1.45
RB1P06400 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6□□□□□ -1.45
RB1P06400 AC108075.1-201ENST00000424692 529 ntBASIC6□□□□□ -1.45
RB1P06400 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6□□□□□ -1.45
RB1P06400 NDUFA5P1-201ENST00000433858 341 ntBASIC6□□□□□ -1.45
RB1P06400 ARL4AP4-201ENST00000434170 518 ntBASIC6□□□□□ -1.45
RB1P06400 OR6D1P-201ENST00000436165 939 ntBASIC6□□□□□ -1.45
RB1P06400 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6□□□□□ -1.45
RB1P06400 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6□□□□□ -1.45
RB1P06400 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6□□□□□ -1.45
RB1P06400 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6□□□□□ -1.45
RB1P06400 AC114878.1-201ENST00000441166 358 ntBASIC6□□□□□ -1.45
RB1P06400 RPS23P9-201ENST00000448848 438 ntBASIC6□□□□□ -1.45
RB1P06400 AL389915.2-201ENST00000454576 441 ntBASIC6□□□□□ -1.45
RB1P06400 RPL35AP28-201ENST00000459730 331 ntBASIC6□□□□□ -1.45
RB1P06400 AC108161.1-201ENST00000461060 402 ntBASIC6□□□□□ -1.45
RB1P06400 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6□□□□□ -1.45
RB1P06400 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6□□□□□ -1.45
RB1P06400 AC104997.1-201ENST00000519761 717 ntBASIC6□□□□□ -1.45
RB1P06400 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC6□□□□□ -1.45
RB1P06400 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6□□□□□ -1.45
RB1P06400 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC6□□□□□ -1.45
RB1P06400 BLZF2P-201ENST00000553776 1130 ntBASIC6□□□□□ -1.45
RB1P06400 MIR3691-201ENST00000578066 90 ntBASIC6□□□□□ -1.45
RB1P06400 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6□□□□□ -1.45
RB1P06400 MIR4420-201ENST00000583944 77 ntBASIC6□□□□□ -1.45
RB1P06400 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6□□□□□ -1.45
RB1P06400 QTRT1P1-201ENST00000604344 1078 ntBASIC6□□□□□ -1.45
RB1P06400 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6□□□□□ -1.45
RB1P06400 RNU6-84P-201ENST00000607737 102 ntBASIC6□□□□□ -1.45
RB1P06400 AP002799.1-201ENST00000623552 423 ntBASIC6□□□□□ -1.45
RB1P06400 AP001784.1-201ENST00000624107 428 ntBASIC6□□□□□ -1.45
RB1P06400 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6□□□□□ -1.45
RB1P06400 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6□□□□□ -1.45
RB1P06400 MSL3P1-202ENST00000440028 1468 ntBASIC6□□□□□ -1.45
RB1P06400 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RB1P06400 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6□□□□□ -1.45
RB1P06400 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
RB1P06400 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6□□□□□ -1.45
RB1P06400 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6□□□□□ -1.45
RB1P06400 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6□□□□□ -1.45
RB1P06400 PROS2P-201ENST00000474651 1951 ntBASIC6□□□□□ -1.45
RB1P06400 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
RB1P06400 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
RB1P06400 DNM1P47-203ENST00000571780 12667 ntBASIC6□□□□□ -1.45
RB1P06400 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
RB1P06400 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.99□□□□□ -1.45
RB1P06400 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.99□□□□□ -1.45
RB1P06400 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
RB1P06400 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.99□□□□□ -1.45
RB1P06400 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RB1P06400 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
RB1P06400 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.99□□□□□ -1.45
RB1P06400 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RB1P06400 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
RB1P06400 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
RB1P06400 RNU6-618P-201ENST00000363518 112 ntBASIC5.99□□□□□ -1.45
RB1P06400 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
RB1P06400 MT-RNR1-201ENST00000389680 954 ntBASIC5.99□□□□□ -1.45
RB1P06400 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.99□□□□□ -1.45
RB1P06400 AL121835.1-201ENST00000404250 354 ntBASIC5.99□□□□□ -1.45
RB1P06400 RPS6P23-201ENST00000413224 722 ntBASIC5.99□□□□□ -1.45
RB1P06400 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RB1P06400 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.99□□□□□ -1.45
RB1P06400 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.99□□□□□ -1.45
RB1P06400 FAM96AP1-201ENST00000430879 482 ntBASIC5.99□□□□□ -1.45
RB1P06400 BTBD7P2-201ENST00000441962 620 ntBASIC5.99□□□□□ -1.45
RB1P06400 AC105399.1-202ENST00000447303 205 ntBASIC5.99□□□□□ -1.45
RB1P06400 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.99□□□□□ -1.45
RB1P06400 RPS18P6-201ENST00000476880 458 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms