Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.72□□□□□ -1.49
APOEP02649 OR2AF1P-201ENST00000454899 889 ntBASIC5.72□□□□□ -1.49
APOEP02649 RANP1-206ENST00000455094 651 ntBASIC5.72□□□□□ -1.49
APOEP02649 AC007386.1-201ENST00000455212 582 ntBASIC5.72□□□□□ -1.49
APOEP02649 RPL35AP19-201ENST00000469425 329 ntBASIC5.72□□□□□ -1.49
APOEP02649 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.72□□□□□ -1.49
APOEP02649 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
APOEP02649 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.72□□□□□ -1.49
APOEP02649 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.72□□□□□ -1.49
APOEP02649 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.72□□□□□ -1.49
APOEP02649 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
APOEP02649 AC021766.1-201ENST00000624404 741 ntBASIC5.72□□□□□ -1.49
APOEP02649 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.72□□□□□ -1.49
APOEP02649 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
APOEP02649 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
APOEP02649 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
APOEP02649 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
APOEP02649 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
APOEP02649 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.72□□□□□ -1.49
APOEP02649 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
APOEP02649 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.72□□□□□ -1.49
APOEP02649 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
APOEP02649 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
APOEP02649 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.71□□□□□ -1.49
APOEP02649 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.71□□□□□ -1.49
APOEP02649 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
APOEP02649 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
APOEP02649 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
APOEP02649 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
APOEP02649 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.71□□□□□ -1.5
APOEP02649 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
APOEP02649 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
APOEP02649 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.71□□□□□ -1.5
APOEP02649 MTCO1P11-201ENST00000429111 1528 ntBASIC5.71□□□□□ -1.5
APOEP02649 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
APOEP02649 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.71□□□□□ -1.5
APOEP02649 U3.28-201ENST00000391249 210 ntBASIC5.71□□□□□ -1.5
APOEP02649 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.71□□□□□ -1.5
APOEP02649 RPSAP35-201ENST00000413753 818 ntBASIC5.71□□□□□ -1.5
APOEP02649 AC009784.1-201ENST00000426484 460 ntBASIC5.71□□□□□ -1.5
APOEP02649 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.71□□□□□ -1.5
APOEP02649 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.71□□□□□ -1.5
APOEP02649 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.71□□□□□ -1.5
APOEP02649 SPRYD7P1-201ENST00000443861 570 ntBASIC5.71□□□□□ -1.5
APOEP02649 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.71□□□□□ -1.5
APOEP02649 GAPDHP14-201ENST00000450472 937 ntBASIC5.71□□□□□ -1.5
APOEP02649 SIAH1P1-201ENST00000479411 923 ntBASIC5.71□□□□□ -1.5
APOEP02649 RN7SL184P-201ENST00000488308 297 ntBASIC5.71□□□□□ -1.5
APOEP02649 RN7SL547P-201ENST00000490793 290 ntBASIC5.71□□□□□ -1.5
APOEP02649 AC108693.1-201ENST00000496068 432 ntBASIC5.71□□□□□ -1.5
APOEP02649 RPSAP51-201ENST00000497462 645 ntBASIC5.71□□□□□ -1.5
APOEP02649 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.71□□□□□ -1.5
APOEP02649 BX510359.5-201ENST00000515651 304 ntBASIC5.71□□□□□ -1.5
APOEP02649 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.71□□□□□ -1.5
APOEP02649 OR4A43P-201ENST00000532938 908 ntBASIC5.71□□□□□ -1.5
APOEP02649 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
APOEP02649 AC078878.1-201ENST00000539832 958 ntBASIC5.71□□□□□ -1.5
APOEP02649 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.71□□□□□ -1.5
APOEP02649 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.71□□□□□ -1.5
APOEP02649 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.71□□□□□ -1.5
APOEP02649 AC007225.2-201ENST00000562529 256 ntBASIC5.71□□□□□ -1.5
APOEP02649 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
APOEP02649 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.71□□□□□ -1.5
APOEP02649 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.71□□□□□ -1.5
APOEP02649 RN7SL753P-201ENST00000581238 290 ntBASIC5.71□□□□□ -1.5
APOEP02649 AL139124.1-201ENST00000609123 421 ntBASIC5.71□□□□□ -1.5
APOEP02649 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.71□□□□□ -1.5
APOEP02649 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
APOEP02649 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
APOEP02649 PROS2P-201ENST00000474651 1951 ntBASIC5.71□□□□□ -1.5
APOEP02649 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.71□□□□□ -1.5
APOEP02649 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.71□□□□□ -1.5
APOEP02649 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
APOEP02649 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.7□□□□□ -1.5
APOEP02649 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
APOEP02649 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.7□□□□□ -1.5
APOEP02649 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
APOEP02649 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
APOEP02649 AC092681.1-201ENST00000297369 291 ntBASIC5.7□□□□□ -1.5
APOEP02649 RN7SKP160-201ENST00000363804 340 ntBASIC5.7□□□□□ -1.5
APOEP02649 RNA5SP187-201ENST00000384400 119 ntBASIC5.7□□□□□ -1.5
APOEP02649 RN7SKP59-201ENST00000410520 314 ntBASIC5.7□□□□□ -1.5
APOEP02649 HMGN2P27-201ENST00000427352 270 ntBASIC5.7□□□□□ -1.5
APOEP02649 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.7□□□□□ -1.5
APOEP02649 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.7□□□□□ -1.5
APOEP02649 AC105399.1-202ENST00000447303 205 ntBASIC5.7□□□□□ -1.5
APOEP02649 AL133445.1-201ENST00000467051 452 ntBASIC5.7□□□□□ -1.5
APOEP02649 EIF3LP3-201ENST00000495197 822 ntBASIC5.7□□□□□ -1.5
APOEP02649 MTND6P2-201ENST00000512226 524 ntBASIC5.7□□□□□ -1.5
APOEP02649 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.7□□□□□ -1.5
APOEP02649 ATP5LP3-201ENST00000514223 304 ntBASIC5.7□□□□□ -1.5
APOEP02649 SCARNA16.4-201ENST00000516956 187 ntBASIC5.7□□□□□ -1.5
APOEP02649 SEPT10P1-201ENST00000517342 1162 ntBASIC5.7□□□□□ -1.5
APOEP02649 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.7□□□□□ -1.5
APOEP02649 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.7□□□□□ -1.5
APOEP02649 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.7□□□□□ -1.5
APOEP02649 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.7□□□□□ -1.5
APOEP02649 AP005403.1-201ENST00000579720 229 ntBASIC5.7□□□□□ -1.5
APOEP02649 SUGT1P3-202ENST00000604259 383 ntBASIC5.7□□□□□ -1.5
APOEP02649 AL162574.1-201ENST00000615702 950 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms