Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A1P02462 MIR192-201ENST00000384915 110 ntBASIC6.28□□□□□ -1.4
COL4A1P02462 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A1P02462 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.28□□□□□ -1.4
COL4A1P02462 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.28□□□□□ -1.4
COL4A1P02462 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.28□□□□□ -1.4
COL4A1P02462 TXNP5-201ENST00000441043 315 ntBASIC6.28□□□□□ -1.4
COL4A1P02462 AL354714.3-201ENST00000447284 493 ntBASIC6.28□□□□□ -1.4
COL4A1P02462 AL513533.1-201ENST00000453728 415 ntBASIC6.28□□□□□ -1.4
COL4A1P02462 RPL23AP72-201ENST00000492447 435 ntBASIC6.28□□□□□ -1.4
COL4A1P02462 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.28□□□□□ -1.4
COL4A1P02462 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.28□□□□□ -1.4
COL4A1P02462 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.28□□□□□ -1.4
COL4A1P02462 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.28□□□□□ -1.4
COL4A1P02462 OR4A6P-201ENST00000534364 970 ntBASIC6.28□□□□□ -1.4
COL4A1P02462 MIR6839-201ENST00000620425 113 ntBASIC6.28□□□□□ -1.4
COL4A1P02462 MIR6758-201ENST00000620653 63 ntBASIC6.28□□□□□ -1.4
COL4A1P02462 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
COL4A1P02462 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A1P02462 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.28□□□□□ -1.4
COL4A1P02462 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.28□□□□□ -1.4
COL4A1P02462 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A1P02462 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.28□□□□□ -1.4
COL4A1P02462 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
COL4A1P02462 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A1P02462 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
COL4A1P02462 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.4
COL4A1P02462 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A1P02462 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.27□□□□□ -1.41
COL4A1P02462 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A1P02462 AC009779.8-201ENST00000641684 4384 ntBASIC6.27□□□□□ -1.41
COL4A1P02462 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
COL4A1P02462 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A1P02462 HMGB3P7-201ENST00000400214 611 ntBASIC6.27□□□□□ -1.41
COL4A1P02462 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A1P02462 RNU4-64P-201ENST00000410795 131 ntBASIC6.27□□□□□ -1.41
COL4A1P02462 AC016397.1-201ENST00000412463 242 ntBASIC6.27□□□□□ -1.41
COL4A1P02462 GTF2IP5-201ENST00000414608 731 ntBASIC6.27□□□□□ -1.41
COL4A1P02462 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.27□□□□□ -1.41
COL4A1P02462 AC016712.1-201ENST00000431088 378 ntBASIC6.27□□□□□ -1.41
COL4A1P02462 AC010733.1-201ENST00000451515 401 ntBASIC6.27□□□□□ -1.41
COL4A1P02462 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6.27□□□□□ -1.41
COL4A1P02462 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A1P02462 MIR4270-201ENST00000581799 70 ntBASIC6.27□□□□□ -1.41
COL4A1P02462 AC005084.1-201ENST00000605160 304 ntBASIC6.27□□□□□ -1.41
COL4A1P02462 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A1P02462 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
COL4A1P02462 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
COL4A1P02462 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.27□□□□□ -1.41
COL4A1P02462 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.27□□□□□ -1.41
COL4A1P02462 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A1P02462 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.27□□□□□ -1.41
COL4A1P02462 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
COL4A1P02462 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A1P02462 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A1P02462 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.27□□□□□ -1.41
COL4A1P02462 AC063976.2-201ENST00000425667 3556 ntBASIC6.27□□□□□ -1.41
COL4A1P02462 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.27□□□□□ -1.41
COL4A1P02462 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A1P02462 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A1P02462 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
COL4A1P02462 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
COL4A1P02462 AC026951.1-201ENST00000559530 2459 ntBASIC6.27□□□□□ -1.41
COL4A1P02462 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A1P02462 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.26□□□□□ -1.41
COL4A1P02462 SNORA66-201ENST00000384792 133 ntBASIC6.26□□□□□ -1.41
COL4A1P02462 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
COL4A1P02462 RSU1P3-201ENST00000412878 835 ntBASIC6.26□□□□□ -1.41
COL4A1P02462 RPL34P27-201ENST00000428810 349 ntBASIC6.26□□□□□ -1.41
COL4A1P02462 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.26□□□□□ -1.41
COL4A1P02462 OR7E125P-201ENST00000443450 846 ntBASIC6.26□□□□□ -1.41
COL4A1P02462 RBMY2TP-201ENST00000451162 947 ntBASIC6.26□□□□□ -1.41
COL4A1P02462 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.26□□□□□ -1.41
COL4A1P02462 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.26□□□□□ -1.41
COL4A1P02462 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.26□□□□□ -1.41
COL4A1P02462 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.26□□□□□ -1.41
COL4A1P02462 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.26□□□□□ -1.41
COL4A1P02462 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.26□□□□□ -1.41
COL4A1P02462 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL4A1P02462 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL4A1P02462 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL4A1P02462 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.26□□□□□ -1.41
COL4A1P02462 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL4A1P02462 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.26□□□□□ -1.41
COL4A1P02462 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL4A1P02462 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL4A1P02462 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL4A1P02462 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
COL4A1P02462 RNU1-32P-201ENST00000363937 159 ntBASIC6.26□□□□□ -1.41
COL4A1P02462 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.26□□□□□ -1.41
COL4A1P02462 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL4A1P02462 AL138878.2-201ENST00000440581 1241 ntBASIC6.26□□□□□ -1.41
COL4A1P02462 RPL21P133-201ENST00000443666 476 ntBASIC6.26□□□□□ -1.41
COL4A1P02462 RPS17P2-201ENST00000461663 408 ntBASIC6.26□□□□□ -1.41
COL4A1P02462 AC006463.2-201ENST00000473326 348 ntBASIC6.26□□□□□ -1.41
COL4A1P02462 GAPDHP56-201ENST00000506031 988 ntBASIC6.26□□□□□ -1.41
COL4A1P02462 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.26□□□□□ -1.41
COL4A1P02462 MIR3667-201ENST00000581025 74 ntBASIC6.26□□□□□ -1.41
COL4A1P02462 AC012557.1-201ENST00000607115 611 ntBASIC6.26□□□□□ -1.41
COL4A1P02462 AL356608.1-201ENST00000610034 820 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms