Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
COL2A1P02458 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL2A1P02458 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
COL2A1P02458 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL2A1P02458 RNU4-64P-201ENST00000410795 131 ntBASIC6.22□□□□□ -1.41
COL2A1P02458 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
COL2A1P02458 NDUFA5P8-201ENST00000449019 346 ntBASIC6.22□□□□□ -1.41
COL2A1P02458 AC092324.1-201ENST00000468671 324 ntBASIC6.22□□□□□ -1.41
COL2A1P02458 AC006427.1-201ENST00000514359 712 ntBASIC6.22□□□□□ -1.41
COL2A1P02458 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.22□□□□□ -1.41
COL2A1P02458 AP001357.1-201ENST00000586304 1053 ntBASIC6.22□□□□□ -1.41
COL2A1P02458 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
COL2A1P02458 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.22□□□□□ -1.41
COL2A1P02458 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.22□□□□□ -1.41
COL2A1P02458 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL2A1P02458 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
COL2A1P02458 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.22□□□□□ -1.41
COL2A1P02458 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
COL2A1P02458 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL2A1P02458 NXF4-202ENST00000416098 1465 ntBASIC6.22□□□□□ -1.41
COL2A1P02458 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL2A1P02458 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL2A1P02458 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL2A1P02458 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL2A1P02458 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
COL2A1P02458 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.22□□□□□ -1.41
COL2A1P02458 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
COL2A1P02458 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
COL2A1P02458 MIR192-201ENST00000384915 110 ntBASIC6.22□□□□□ -1.41
COL2A1P02458 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
COL2A1P02458 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL2A1P02458 CHMP1B2P-201ENST00000399581 597 ntBASIC6.22□□□□□ -1.41
COL2A1P02458 HSPA8P15-201ENST00000401676 786 ntBASIC6.22□□□□□ -1.41
COL2A1P02458 AC068138.1-201ENST00000412635 217 ntBASIC6.22□□□□□ -1.41
COL2A1P02458 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.22□□□□□ -1.41
COL2A1P02458 RHOT1P3-201ENST00000436571 331 ntBASIC6.22□□□□□ -1.41
COL2A1P02458 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.22□□□□□ -1.41
COL2A1P02458 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.22□□□□□ -1.41
COL2A1P02458 SEPT10P1-201ENST00000517342 1162 ntBASIC6.22□□□□□ -1.41
COL2A1P02458 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.22□□□□□ -1.41
COL2A1P02458 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.22□□□□□ -1.41
COL2A1P02458 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.22□□□□□ -1.41
COL2A1P02458 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.22□□□□□ -1.41
COL2A1P02458 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL2A1P02458 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
COL2A1P02458 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
COL2A1P02458 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
COL2A1P02458 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.21□□□□□ -1.41
COL2A1P02458 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
COL2A1P02458 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
COL2A1P02458 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
COL2A1P02458 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
COL2A1P02458 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL2A1P02458 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL2A1P02458 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
COL2A1P02458 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.21□□□□□ -1.42
COL2A1P02458 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
COL2A1P02458 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL2A1P02458 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL2A1P02458 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.21□□□□□ -1.42
COL2A1P02458 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.21□□□□□ -1.42
COL2A1P02458 AL590139.1-201ENST00000416267 400 ntBASIC6.21□□□□□ -1.42
COL2A1P02458 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL2A1P02458 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.21□□□□□ -1.42
COL2A1P02458 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.21□□□□□ -1.42
COL2A1P02458 BRD9P1-201ENST00000529855 560 ntBASIC6.21□□□□□ -1.42
COL2A1P02458 BNIP3P1-201ENST00000547295 580 ntBASIC6.21□□□□□ -1.42
COL2A1P02458 PCNPP1-201ENST00000552501 511 ntBASIC6.21□□□□□ -1.42
COL2A1P02458 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.21□□□□□ -1.42
COL2A1P02458 MIR4691-201ENST00000583764 85 ntBASIC6.21□□□□□ -1.42
COL2A1P02458 AC005618.4-201ENST00000625053 554 ntBASIC6.21□□□□□ -1.42
COL2A1P02458 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL2A1P02458 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL2A1P02458 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL2A1P02458 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
COL2A1P02458 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.2□□□□□ -1.42
COL2A1P02458 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
COL2A1P02458 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.2□□□□□ -1.42
COL2A1P02458 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.2□□□□□ -1.42
COL2A1P02458 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
COL2A1P02458 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL2A1P02458 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL2A1P02458 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.2□□□□□ -1.42
COL2A1P02458 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.2□□□□□ -1.42
COL2A1P02458 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
COL2A1P02458 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL2A1P02458 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
COL2A1P02458 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL2A1P02458 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
COL2A1P02458 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.2□□□□□ -1.42
COL2A1P02458 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL2A1P02458 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.2□□□□□ -1.42
COL2A1P02458 AC104837.2-201ENST00000427236 424 ntBASIC6.2□□□□□ -1.42
COL2A1P02458 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.2□□□□□ -1.42
COL2A1P02458 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.2□□□□□ -1.42
COL2A1P02458 RN7SL385P-201ENST00000468873 276 ntBASIC6.2□□□□□ -1.42
COL2A1P02458 AC096741.1-201ENST00000472250 846 ntBASIC6.2□□□□□ -1.42
COL2A1P02458 RN7SL817P-201ENST00000480777 288 ntBASIC6.2□□□□□ -1.42
COL2A1P02458 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.2□□□□□ -1.42
COL2A1P02458 AC012400.1-201ENST00000518452 381 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms