Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC068831.8-201ENST00000620171 435 ntBASIC8.2□□□□□ -1.1
RAPGEF3O95398 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RAPGEF3O95398 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RAPGEF3O95398 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
RAPGEF3O95398 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
RAPGEF3O95398 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RAPGEF3O95398 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
RAPGEF3O95398 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RAPGEF3O95398 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 AL449283.1-201ENST00000602631 3403 ntBASIC8.19□□□□□ -1.1
RAPGEF3O95398 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
RAPGEF3O95398 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RAPGEF3O95398 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 SNORA70.2-201ENST00000364506 135 ntBASIC8.19□□□□□ -1.1
RAPGEF3O95398 AL589655.1-201ENST00000405398 482 ntBASIC8.19□□□□□ -1.1
RAPGEF3O95398 RNU6-564P-201ENST00000410983 104 ntBASIC8.19□□□□□ -1.1
RAPGEF3O95398 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 AC012519.1-201ENST00000424588 610 ntBASIC8.19□□□□□ -1.1
RAPGEF3O95398 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 NDUFA5P1-201ENST00000433858 341 ntBASIC8.19□□□□□ -1.1
RAPGEF3O95398 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 HCG14-201ENST00000444986 413 ntTSL 2 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 AL672138.1-201ENST00000450604 1015 ntBASIC8.19□□□□□ -1.1
RAPGEF3O95398 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 AC025423.2-201ENST00000537570 439 ntBASIC8.19□□□□□ -1.1
RAPGEF3O95398 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 AC008147.3-201ENST00000548666 354 ntBASIC8.19□□□□□ -1.1
RAPGEF3O95398 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 AC011270.1-201ENST00000558606 583 ntBASIC8.19□□□□□ -1.1
RAPGEF3O95398 AC136624.4-201ENST00000573044 370 ntBASIC8.19□□□□□ -1.1
RAPGEF3O95398 MIR4691-201ENST00000583764 85 ntBASIC8.19□□□□□ -1.1
RAPGEF3O95398 RNF138P2-201ENST00000603490 592 ntBASIC8.19□□□□□ -1.1
RAPGEF3O95398 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RAPGEF3O95398 OR4G1P-202ENST00000641173 1788 ntBASIC8.19□□□□□ -1.1
RAPGEF3O95398 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RAPGEF3O95398 AL353796.1-201ENST00000561542 3241 ntBASIC8.19□□□□□ -1.1
RAPGEF3O95398 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RAPGEF3O95398 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC8.19□□□□□ -1.1
RAPGEF3O95398 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
RAPGEF3O95398 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
RAPGEF3O95398 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
RAPGEF3O95398 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RAPGEF3O95398 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
RAPGEF3O95398 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RAPGEF3O95398 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RAPGEF3O95398 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC8.18□□□□□ -1.1
RAPGEF3O95398 AL607077.1-201ENST00000401718 499 ntBASIC8.18□□□□□ -1.1
RAPGEF3O95398 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC8.18□□□□□ -1.1
RAPGEF3O95398 AC016027.5-201ENST00000427227 210 ntBASIC8.18□□□□□ -1.1
RAPGEF3O95398 AC074367.1-201ENST00000438685 1125 ntBASIC8.18□□□□□ -1.1
RAPGEF3O95398 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC8.18□□□□□ -1.1
RAPGEF3O95398 GAPDHP25-201ENST00000447061 1001 ntBASIC8.18□□□□□ -1.1
RAPGEF3O95398 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC8.18□□□□□ -1.1
RAPGEF3O95398 AC034205.1-201ENST00000520621 638 ntBASIC8.18□□□□□ -1.1
RAPGEF3O95398 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC8.18□□□□□ -1.1
RAPGEF3O95398 EDDM3DP-201ENST00000554692 434 ntBASIC8.18□□□□□ -1.1
RAPGEF3O95398 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC8.18□□□□□ -1.1
RAPGEF3O95398 MIR1254-2-201ENST00000579553 63 ntBASIC8.18□□□□□ -1.1
RAPGEF3O95398 DHFRP1-201ENST00000579682 559 ntBASIC8.18□□□□□ -1.1
RAPGEF3O95398 AL627230.1-201ENST00000613077 211 ntBASIC8.18□□□□□ -1.1
RAPGEF3O95398 AL591926.8-201ENST00000616876 211 ntBASIC8.18□□□□□ -1.1
RAPGEF3O95398 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC8.18□□□□□ -1.1
RAPGEF3O95398 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RAPGEF3O95398 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
RAPGEF3O95398 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
RAPGEF3O95398 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
RAPGEF3O95398 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC8.18□□□□□ -1.1
RAPGEF3O95398 AC068446.1-201ENST00000556425 1549 ntBASIC8.18□□□□□ -1.1
RAPGEF3O95398 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RAPGEF3O95398 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC8.17□□□□□ -1.1
RAPGEF3O95398 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC8.17□□□□□ -1.1
RAPGEF3O95398 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
RAPGEF3O95398 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RAPGEF3O95398 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
RAPGEF3O95398 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
RAPGEF3O95398 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
RAPGEF3O95398 RNA5SP479-201ENST00000364858 117 ntBASIC8.17□□□□□ -1.1
RAPGEF3O95398 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC8.17□□□□□ -1.1
RAPGEF3O95398 RNU6-1176P-201ENST00000390955 107 ntBASIC8.17□□□□□ -1.1
RAPGEF3O95398 AC119751.6-201ENST00000416712 186 ntBASIC8.17□□□□□ -1.1
RAPGEF3O95398 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC8.17□□□□□ -1.1
RAPGEF3O95398 AC068287.1-201ENST00000430283 295 ntBASIC8.17□□□□□ -1.1
RAPGEF3O95398 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC8.17□□□□□ -1.1
RAPGEF3O95398 AC234781.3-201ENST00000452540 973 ntBASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms