Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.32□□□□□ -1.56
PDLIM1O00151 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.32□□□□□ -1.56
PDLIM1O00151 HSPD1P12-201ENST00000429127 1069 ntBASIC5.32□□□□□ -1.56
PDLIM1O00151 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.32□□□□□ -1.56
PDLIM1O00151 ATP5LP2-201ENST00000440646 311 ntBASIC5.32□□□□□ -1.56
PDLIM1O00151 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.32□□□□□ -1.56
PDLIM1O00151 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.32□□□□□ -1.56
PDLIM1O00151 AL445466.1-201ENST00000448432 357 ntBASIC5.32□□□□□ -1.56
PDLIM1O00151 AC005077.1-201ENST00000449226 375 ntBASIC5.32□□□□□ -1.56
PDLIM1O00151 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.32□□□□□ -1.56
PDLIM1O00151 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.32□□□□□ -1.56
PDLIM1O00151 AC098847.1-201ENST00000473094 348 ntBASIC5.32□□□□□ -1.56
PDLIM1O00151 AC025458.1-201ENST00000506046 166 ntBASIC5.32□□□□□ -1.56
PDLIM1O00151 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.32□□□□□ -1.56
PDLIM1O00151 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.32□□□□□ -1.56
PDLIM1O00151 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.32□□□□□ -1.56
PDLIM1O00151 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.32□□□□□ -1.56
PDLIM1O00151 AC139697.1-201ENST00000548429 745 ntBASIC5.32□□□□□ -1.56
PDLIM1O00151 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.32□□□□□ -1.56
PDLIM1O00151 AC084759.1-201ENST00000561168 290 ntBASIC5.32□□□□□ -1.56
PDLIM1O00151 DHFRP1-201ENST00000579682 559 ntBASIC5.32□□□□□ -1.56
PDLIM1O00151 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.32□□□□□ -1.56
PDLIM1O00151 AC079315.1-201ENST00000602952 623 ntBASIC5.32□□□□□ -1.56
PDLIM1O00151 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.32□□□□□ -1.56
PDLIM1O00151 AL139124.1-201ENST00000609123 421 ntBASIC5.32□□□□□ -1.56
PDLIM1O00151 AC108673.3-201ENST00000609183 335 ntBASIC5.32□□□□□ -1.56
PDLIM1O00151 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM1O00151 AC245014.3-201ENST00000618589 347 ntBASIC5.32□□□□□ -1.56
PDLIM1O00151 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.32□□□□□ -1.56
PDLIM1O00151 AC074140.1-201ENST00000621617 208 ntBASIC5.32□□□□□ -1.56
PDLIM1O00151 AL136228.1-201ENST00000622221 319 ntBASIC5.32□□□□□ -1.56
PDLIM1O00151 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.32□□□□□ -1.56
PDLIM1O00151 OR11H2-202ENST00000641517 1085 ntBASIC5.32□□□□□ -1.56
PDLIM1O00151 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM1O00151 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
PDLIM1O00151 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM1O00151 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM1O00151 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.32□□□□□ -1.56
PDLIM1O00151 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.32□□□□□ -1.56
PDLIM1O00151 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
PDLIM1O00151 GNL2P1-201ENST00000451274 2190 ntBASIC5.32□□□□□ -1.56
PDLIM1O00151 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM1O00151 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM1O00151 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM1O00151 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
PDLIM1O00151 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM1O00151 TRIM51GP-201ENST00000534741 1350 ntBASIC5.31□□□□□ -1.56
PDLIM1O00151 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM1O00151 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM1O00151 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM1O00151 MAPK10-286ENST00000641208 8747 ntBASIC5.31□□□□□ -1.56
PDLIM1O00151 AC079298.1-201ENST00000625026 1619 ntBASIC5.31□□□□□ -1.56
PDLIM1O00151 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM1O00151 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM1O00151 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.31□□□□□ -1.56
PDLIM1O00151 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM1O00151 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM1O00151 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PDLIM1O00151 RNFT1P3-201ENST00000340898 1052 ntBASIC5.31□□□□□ -1.56
PDLIM1O00151 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.31□□□□□ -1.56
PDLIM1O00151 AL691447.1-201ENST00000419456 387 ntBASIC5.31□□□□□ -1.56
PDLIM1O00151 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM1O00151 AC019205.1-201ENST00000421830 730 ntBASIC5.31□□□□□ -1.56
PDLIM1O00151 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.31□□□□□ -1.56
PDLIM1O00151 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PDLIM1O00151 AL138899.2-201ENST00000439139 499 ntBASIC5.31□□□□□ -1.56
PDLIM1O00151 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM1O00151 HMGN1P2-201ENST00000445197 310 ntBASIC5.31□□□□□ -1.56
PDLIM1O00151 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM1O00151 TAAR4P-201ENST00000454843 1039 ntBASIC5.31□□□□□ -1.56
PDLIM1O00151 CST12P-201ENST00000457644 362 ntBASIC5.31□□□□□ -1.56
PDLIM1O00151 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
PDLIM1O00151 DUTP1-201ENST00000493631 470 ntBASIC5.31□□□□□ -1.56
PDLIM1O00151 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.31□□□□□ -1.56
PDLIM1O00151 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM1O00151 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM1O00151 RN7SKP238-201ENST00000516483 249 ntBASIC5.31□□□□□ -1.56
PDLIM1O00151 RNU4-18P-201ENST00000516751 149 ntBASIC5.31□□□□□ -1.56
PDLIM1O00151 RN7SKP5-201ENST00000517045 272 ntBASIC5.31□□□□□ -1.56
PDLIM1O00151 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.31□□□□□ -1.56
PDLIM1O00151 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM1O00151 AC027369.2-201ENST00000528030 440 ntBASIC5.31□□□□□ -1.56
PDLIM1O00151 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM1O00151 AC125612.1-201ENST00000547580 377 ntBASIC5.31□□□□□ -1.56
PDLIM1O00151 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM1O00151 AC090888.3-201ENST00000558917 509 ntBASIC5.31□□□□□ -1.56
PDLIM1O00151 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM1O00151 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM1O00151 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM1O00151 AC005244.1-201ENST00000582566 339 ntBASIC5.31□□□□□ -1.56
PDLIM1O00151 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM1O00151 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM1O00151 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM1O00151 OR7M1P-201ENST00000608946 533 ntBASIC5.31□□□□□ -1.56
PDLIM1O00151 AL021918.2-201ENST00000613415 194 ntBASIC5.31□□□□□ -1.56
PDLIM1O00151 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM1O00151 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM1O00151 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM1O00151 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM1O00151 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms