Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC004817.4-201ENST00000602396 3625 ntBASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 RNA5SP319-201ENST00000362768 119 ntBASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 MTND6P12-201ENST00000428247 522 ntBASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 GAPDHP14-201ENST00000450472 937 ntBASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 AC138832.1-201ENST00000522871 556 ntBASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 AC015720.2-201ENST00000567709 334 ntBASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 AC125494.2-201ENST00000602431 657 ntBASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 AC005252.1-201ENST00000604518 1063 ntBASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 AC008833.1-201ENST00000611633 691 ntBASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 MTCO1P1-201ENST00000624263 1081 ntBASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 RNA5SP223-201ENST00000365174 120 ntBASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 MIR105-1-201ENST00000385222 81 ntBASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 CLUHP1-201ENST00000435012 1190 ntBASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 RPL23AP19-201ENST00000436229 369 ntBASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 HMGN1P36-201ENST00000446623 298 ntBASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 AC073909.1-201ENST00000447112 999 ntBASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 AC079168.1-201ENST00000458741 345 ntBASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 RN7SKP70-201ENST00000516655 271 ntBASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 AC135626.1-201ENST00000556983 435 ntBASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 RN7SL708P-201ENST00000580952 299 ntBASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 FO393422.1-201ENST00000603908 708 ntBASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 AC009597.2-201ENST00000604659 592 ntBASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 AL162431.4-201ENST00000604674 411 ntBASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 RN7SL787P-201ENST00000613000 284 ntBASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRAV27A0A087WT01 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 AC063976.2-201ENST00000425667 3556 ntBASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 RNA5SP487-201ENST00000410186 122 ntBASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 RNU2-18P-201ENST00000411224 162 ntBASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 PCNPP4-201ENST00000414817 517 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms