Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC093816.1-201ENST00000515076 913 ntBASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 AC093878.1-201ENST00000515630 432 ntBASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 SULT1C2P2-201ENST00000562517 294 ntBASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 GOSR1-212ENST00000581721 756 ntTSL 5 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 AC067773.1-201ENST00000603284 1094 ntBASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 AL139099.4-201ENST00000614802 114 ntBASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 SMIM2-202ENST00000617002 255 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 AL035461.2-201ENST00000619201 524 ntBASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 AP003400.3-201ENST00000624904 346 ntBASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 AC132825.8-201ENST00000640783 297 ntBASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 AC006210.2-201ENST00000367074 1545 ntBASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 AL133412.1-201ENST00000380194 2992 ntBASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 AL672167.1-203ENST00000641299 2975 ntBASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 CENPK-208ENST00000508421 1586 ntTSL 3 BASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 SAMMSON-226ENST00000642089 1582 ntBASIC2.66□□□□□ -1.98
LINC01558Q9Y6Z2 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
LINC01558Q9Y6Z2 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC2.65□□□□□ -1.98
LINC01558Q9Y6Z2 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
LINC01558Q9Y6Z2 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC2.65□□□□□ -1.98
LINC01558Q9Y6Z2 C1GALT1C1-202ENST00000371313 1492 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
LINC01558Q9Y6Z2 AC095050.2-201ENST00000510748 1458 ntBASIC2.65□□□□□ -1.98
LINC01558Q9Y6Z2 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
LINC01558Q9Y6Z2 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC2.65□□□□□ -1.98
LINC01558Q9Y6Z2 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
LINC01558Q9Y6Z2 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
LINC01558Q9Y6Z2 AC017007.4-201ENST00000503353 1352 ntBASIC2.65□□□□□ -1.98
LINC01558Q9Y6Z2 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC2.65□□□□□ -1.98
LINC01558Q9Y6Z2 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC2.65□□□□□ -1.98
LINC01558Q9Y6Z2 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 AC008549.2-201ENST00000333482 706 ntBASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 AC005294.1-201ENST00000355509 281 ntBASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 ST3GAL3-211ENST00000361812 513 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 RN7SKP44-201ENST00000363602 316 ntBASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 RNU4-59P-201ENST00000364447 116 ntBASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 TMEM244-201ENST00000368143 545 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 RNA5SP207-201ENST00000390874 107 ntBASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 RPL23AP7-201ENST00000391616 738 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 AL590286.1-201ENST00000404178 291 ntBASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 DNAJA1P4-201ENST00000406473 1166 ntBASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 MIR1183-201ENST00000408856 89 ntBASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 VN1R33P-201ENST00000411800 887 ntBASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 TAC3-205ENST00000415231 588 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 AC234779.1-201ENST00000425910 285 ntBASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 DPY19L1P2-201ENST00000426647 915 ntBASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 ETF1P1-206ENST00000427296 984 ntBASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 BX119321.1-201ENST00000428912 797 ntBASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 RPL7P4-203ENST00000430239 730 ntBASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 MAPRE1P3-201ENST00000435438 796 ntBASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 RPL7AP61-201ENST00000443410 636 ntBASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 PPIAP32-201ENST00000449940 472 ntBASIC2.65□□□□□ -1.99
LINC01558Q9Y6Z2 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms