Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 CD24P2-201ENST00000565486 219 ntBASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 AC006272.2-201ENST00000594725 163 ntBASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 AC063977.5-201ENST00000601044 974 ntBASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 AL499605.1-201ENST00000604628 403 ntBASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 CXADRP3-202ENST00000617265 1100 ntBASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AC104297.1-201ENST00000393779 870 ntBASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 RN7SKP240-201ENST00000410583 375 ntBASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AC096644.3-201ENST00000416788 338 ntBASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 NENFP1-201ENST00000419476 466 ntBASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AL022331.1-201ENST00000429025 477 ntBASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 NANOGP9-201ENST00000439890 892 ntBASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 DNAJA1P5-201ENST00000440278 943 ntBASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AL596266.1-201ENST00000448132 400 ntBASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 DEFB109A-201ENST00000482450 265 ntBASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 DUTP7-201ENST00000507982 486 ntBASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AC091912.1-201ENST00000511351 248 ntBASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AL671862.1-201ENST00000515851 349 ntBASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 RNA5SP271-201ENST00000516700 88 ntBASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 SNORA70.20-201ENST00000516848 126 ntBASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 FTH1P11-201ENST00000517577 551 ntBASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AC130364.2-201ENST00000528639 604 ntBASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AC015802.2-201ENST00000589690 189 ntBASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AC129915.3-201ENST00000634128 948 ntBASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AL603750.1-201ENST00000624216 1717 ntBASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 AL359715.3-201ENST00000569267 2123 ntBASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDD3Q9Y3P4 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 Z95331.1-201ENST00000623075 23112 ntBASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 VPS35P1-201ENST00000563400 1518 ntBASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 GAPDHP24-201ENST00000328713 983 ntBASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 RNA5SP30-201ENST00000365552 115 ntBASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 RNU6-167P-201ENST00000384292 106 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms