Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC010325.3-201ENST00000641084 394 ntBASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 AC027088.4-201ENST00000611559 1947 ntBASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 QRSL1P1-201ENST00000400977 1540 ntBASIC4.62□□□□□ -1.67
KCNIP3Q9Y2W7 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AC011447.7-201ENST00000624228 1590 ntBASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AC006206.1-201ENST00000544842 3387 ntBASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 OR13C3-201ENST00000374781 1108 ntBASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 GAPDHP15-201ENST00000398586 975 ntBASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 PPIAP9-201ENST00000403866 498 ntBASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 RPL7AP51-201ENST00000422016 760 ntBASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AC017019.1-201ENST00000426129 261 ntBASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 HSPD1P12-201ENST00000429127 1069 ntBASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 RPL19P16-201ENST00000433839 588 ntBASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 RPEP4-201ENST00000437636 602 ntBASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AL353662.1-201ENST00000439099 327 ntBASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AC005077.1-201ENST00000449226 375 ntBASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AL591363.1-201ENST00000450091 483 ntBASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 RBMY2TP-201ENST00000451162 947 ntBASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 GEMIN2P1-201ENST00000454246 752 ntBASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 UBFD1P1-201ENST00000473259 814 ntBASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AC113367.2-201ENST00000505749 160 ntBASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AC139365.2-201ENST00000517972 253 ntBASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 CDC42P3-201ENST00000518493 633 ntBASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AC009879.1-201ENST00000520029 839 ntBASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 WBP1LP3-201ENST00000523033 208 ntBASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AC006349.1-201ENST00000555526 235 ntBASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AC007346.1-201ENST00000569208 867 ntBASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 SCN1A-220ENST00000641603 12506 ntBASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 AC107021.2-201ENST00000567714 2095 ntBASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KCNIP3Q9Y2W7 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 RNA5SP110-201ENST00000362638 115 ntBASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 RPL21P67-201ENST00000402896 478 ntBASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 RN7SKP29-201ENST00000410957 272 ntBASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 RN7SKP108-201ENST00000411367 328 ntBASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 AC211486.3-201ENST00000412694 621 ntBASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 COX5BP7-201ENST00000414780 274 ntBASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 AC106901.1-201ENST00000425086 698 ntBASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 AC092865.3-201ENST00000425390 1026 ntBASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 BX119321.1-201ENST00000428912 797 ntBASIC4.6□□□□□ -1.67
KCNIP3Q9Y2W7 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms