Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ZNF519P1-201ENST00000449011 1626 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 MTND5P11-201ENST00000511037 1812 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 Z99496.1-201ENST00000469424 1477 ntBASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 AC010894.1-201ENST00000313760 361 ntBASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 RNU4-21P-201ENST00000362802 126 ntBASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 AC008171.1-201ENST00000395058 200 ntBASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 SNORA81-201ENST00000408493 178 ntBASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 GLRXP1-201ENST00000423261 334 ntBASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 PA2G4P6-201ENST00000438325 1197 ntBASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 AC007383.1-201ENST00000445875 636 ntBASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 SUMO1P1-201ENST00000497904 306 ntBASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 HMGN1P12-201ENST00000499125 195 ntBASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 ACTR3BP4-201ENST00000503033 1244 ntBASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 AC026427.2-201ENST00000506228 536 ntBASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 MTHFD2P4-201ENST00000515074 1025 ntBASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 RNU6-1028P-201ENST00000517164 93 ntBASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 IGHVIII-26-1-201ENST00000520387 250 ntBASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 AC121758.1-202ENST00000556917 658 ntBASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 VN1R107P-201ENST00000601784 209 ntBASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 AL391497.1-201ENST00000608671 547 ntBASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 AC091304.9-201ENST00000612091 226 ntBASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 AC027807.2-201ENST00000616099 408 ntBASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 AC008443.7-201ENST00000622195 246 ntBASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 MAPK10-323ENST00000641493 3207 ntBASIC8.92□□□□□ -0.98
PDZRN3Q9UPQ7 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 AC217777.1-201ENST00000570034 1471 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 RNU1-5P-201ENST00000362684 144 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 AC019178.1-201ENST00000392337 440 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 AC004987.3-201ENST00000413879 771 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 PTP4A1P3-201ENST00000433661 420 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 AC104850.1-201ENST00000435940 476 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 AC092427.1-201ENST00000439177 601 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 AC083855.1-201ENST00000440041 258 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 CEACAMP5-201ENST00000448037 961 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 DPPA3P1-201ENST00000448050 469 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 AL109741.2-201ENST00000455561 343 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 UOX-201ENST00000471089 899 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 TMED11P-201ENST00000479478 690 ntBASIC8.91□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms