Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 AKAP17BP-201ENST00000431706 2719 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 SNORD113-6-201ENST00000363345 75 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 Y_RNA.201-201ENST00000364052 96 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 RPS7P9-201ENST00000414704 586 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 AL356320.2-201ENST00000417263 507 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 QRSL1P2-201ENST00000418582 964 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 NME1P1-201ENST00000420914 382 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 RPL7AP51-201ENST00000422016 760 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 LINC00328-2P-201ENST00000436585 219 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 EMC3-AS1-205ENST00000438698 534 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 H3F3BP1-201ENST00000440551 403 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 RPL34P26-201ENST00000445636 354 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 AC007383.1-201ENST00000445875 636 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 AL161722.1-201ENST00000446972 1032 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 SNX18P26-201ENST00000458433 740 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 AC116917.1-201ENST00000520558 305 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 IGHV1-14-201ENST00000523391 241 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 AC073916.1-201ENST00000545095 130 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 AC090115.2-201ENST00000548060 883 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 GARSP1-201ENST00000570895 719 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 AL354943.1-201ENST00000572103 781 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 RN7SL475P-201ENST00000583379 298 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 AC015802.2-201ENST00000589690 189 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 AC119751.7-201ENST00000600494 245 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 AL020997.3-201ENST00000602843 359 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 AC016877.3-201ENST00000606778 504 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 U1.34-201ENST00000618578 162 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 AC011503.2-201ENST00000594230 1500 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 MAPK10-287ENST00000641217 3037 ntBASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
PPARGC1AQ9UBK2 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
PPARGC1AQ9UBK2 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.36
PPARGC1AQ9UBK2 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PPARGC1AQ9UBK2 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
PPARGC1AQ9UBK2 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PPARGC1AQ9UBK2 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PPARGC1AQ9UBK2 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
PPARGC1AQ9UBK2 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.58□□□□□ -1.36
PPARGC1AQ9UBK2 AL136984.1-201ENST00000607611 1893 ntBASIC6.58□□□□□ -1.36
PPARGC1AQ9UBK2 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.58□□□□□ -1.36
PPARGC1AQ9UBK2 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PPARGC1AQ9UBK2 RNU6-623P-201ENST00000363143 105 ntBASIC6.58□□□□□ -1.36
PPARGC1AQ9UBK2 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PPARGC1AQ9UBK2 Y_RNA.472-201ENST00000384322 102 ntBASIC6.58□□□□□ -1.36
PPARGC1AQ9UBK2 AL078595.1-201ENST00000404458 226 ntBASIC6.58□□□□□ -1.36
PPARGC1AQ9UBK2 RNA5SP198-201ENST00000410376 127 ntBASIC6.58□□□□□ -1.36
PPARGC1AQ9UBK2 U3.43-201ENST00000410734 213 ntBASIC6.58□□□□□ -1.36
PPARGC1AQ9UBK2 AC092638.1-201ENST00000411966 1275 ntBASIC6.58□□□□□ -1.36
PPARGC1AQ9UBK2 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.58□□□□□ -1.36
PPARGC1AQ9UBK2 AL034379.1-201ENST00000423216 253 ntBASIC6.58□□□□□ -1.36
PPARGC1AQ9UBK2 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.58□□□□□ -1.36
PPARGC1AQ9UBK2 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.58□□□□□ -1.36
PPARGC1AQ9UBK2 PRUNEP1-201ENST00000425846 705 ntBASIC6.58□□□□□ -1.36
PPARGC1AQ9UBK2 AC005345.1-201ENST00000431868 217 ntBASIC6.58□□□□□ -1.36
PPARGC1AQ9UBK2 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.58□□□□□ -1.36
PPARGC1AQ9UBK2 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.58□□□□□ -1.36
PPARGC1AQ9UBK2 DNAJA1P5-201ENST00000440278 943 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms