Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL20A1Q9P218 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL20A1Q9P218 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL20A1Q9P218 AC011933.2-201ENST00000578539 2790 ntBASIC6.44□□□□□ -1.38
COL20A1Q9P218 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
COL20A1Q9P218 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.43□□□□□ -1.38
COL20A1Q9P218 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL20A1Q9P218 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL20A1Q9P218 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
COL20A1Q9P218 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL20A1Q9P218 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.43□□□□□ -1.38
COL20A1Q9P218 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL20A1Q9P218 AP000568.1-201ENST00000282964 442 ntBASIC6.43□□□□□ -1.38
COL20A1Q9P218 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
COL20A1Q9P218 GAPDHP24-201ENST00000328713 983 ntBASIC6.43□□□□□ -1.38
COL20A1Q9P218 SNORD1C-201ENST00000363315 78 ntBASIC6.43□□□□□ -1.38
COL20A1Q9P218 SNORD65-201ENST00000391079 73 ntBASIC6.43□□□□□ -1.38
COL20A1Q9P218 SNORA11B-201ENST00000408175 129 ntBASIC6.43□□□□□ -1.38
COL20A1Q9P218 RN7SKP59-201ENST00000410520 314 ntBASIC6.43□□□□□ -1.38
COL20A1Q9P218 AL356968.2-201ENST00000412769 1257 ntBASIC6.43□□□□□ -1.38
COL20A1Q9P218 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.43□□□□□ -1.38
COL20A1Q9P218 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC6.43□□□□□ -1.38
COL20A1Q9P218 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.43□□□□□ -1.38
COL20A1Q9P218 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL20A1Q9P218 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.43□□□□□ -1.38
COL20A1Q9P218 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.43□□□□□ -1.38
COL20A1Q9P218 RPS23P2-201ENST00000463671 415 ntBASIC6.43□□□□□ -1.38
COL20A1Q9P218 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.43□□□□□ -1.38
COL20A1Q9P218 NPM1P21-201ENST00000513394 762 ntBASIC6.43□□□□□ -1.38
COL20A1Q9P218 RNU6-1102P-201ENST00000516149 96 ntBASIC6.43□□□□□ -1.38
COL20A1Q9P218 AC067904.2-201ENST00000517322 1283 ntBASIC6.43□□□□□ -1.38
COL20A1Q9P218 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.43□□□□□ -1.38
COL20A1Q9P218 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.43□□□□□ -1.38
COL20A1Q9P218 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.43□□□□□ -1.38
COL20A1Q9P218 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.43□□□□□ -1.38
COL20A1Q9P218 AC015720.2-201ENST00000567709 334 ntBASIC6.43□□□□□ -1.38
COL20A1Q9P218 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.43□□□□□ -1.38
COL20A1Q9P218 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.43□□□□□ -1.38
COL20A1Q9P218 AC005242.1-201ENST00000585658 438 ntBASIC6.43□□□□□ -1.38
COL20A1Q9P218 IMMP1LP3-201ENST00000604197 224 ntBASIC6.43□□□□□ -1.38
COL20A1Q9P218 SUGT1P3-202ENST00000604259 383 ntBASIC6.43□□□□□ -1.38
COL20A1Q9P218 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.43□□□□□ -1.38
COL20A1Q9P218 AL355816.2-201ENST00000610049 647 ntBASIC6.43□□□□□ -1.38
COL20A1Q9P218 AC015922.4-201ENST00000612568 690 ntBASIC6.43□□□□□ -1.38
COL20A1Q9P218 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.43□□□□□ -1.38
COL20A1Q9P218 AC022960.3-201ENST00000619794 441 ntBASIC6.43□□□□□ -1.38
COL20A1Q9P218 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.43□□□□□ -1.38
COL20A1Q9P218 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.43□□□□□ -1.38
COL20A1Q9P218 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL20A1Q9P218 AL731532.1-201ENST00000623972 4236 ntBASIC6.43□□□□□ -1.38
COL20A1Q9P218 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL20A1Q9P218 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL20A1Q9P218 SAMM50P1-201ENST00000455403 1399 ntBASIC6.43□□□□□ -1.38
COL20A1Q9P218 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL20A1Q9P218 CASC19-248ENST00000641674 1356 ntBASIC6.43□□□□□ -1.38
COL20A1Q9P218 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL20A1Q9P218 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL20A1Q9P218 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL20A1Q9P218 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL20A1Q9P218 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL20A1Q9P218 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL20A1Q9P218 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
COL20A1Q9P218 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
COL20A1Q9P218 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL20A1Q9P218 SNX18P3-202ENST00000565670 1750 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 CCAT2-201ENST00000630920 1752 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL20A1Q9P218 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
COL20A1Q9P218 RNU6-1251P-201ENST00000364502 107 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 RN7SKP28-201ENST00000364770 305 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.42□□□□□ -1.38
COL20A1Q9P218 RPL23AP17-201ENST00000401064 499 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 NPM1P38-201ENST00000403835 865 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 GAPDHP42-201ENST00000406848 981 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.42□□□□□ -1.38
COL20A1Q9P218 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.42□□□□□ -1.38
COL20A1Q9P218 GLUD1P9-201ENST00000420997 1173 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 AL355433.1-201ENST00000422804 300 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
COL20A1Q9P218 AC245517.2-201ENST00000442890 346 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 SPRYD7P1-201ENST00000443861 570 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.42□□□□□ -1.38
COL20A1Q9P218 CCRL1P1-201ENST00000449542 1053 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 AC100832.1-201ENST00000471945 383 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL20A1Q9P218 COPS8P2-201ENST00000473228 627 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 RPL5P12-201ENST00000477071 851 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 AC079080.1-201ENST00000479841 822 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 AC010374.2-201ENST00000512933 535 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 SCARNA1-201ENST00000517138 166 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.42□□□□□ -1.38
COL20A1Q9P218 MTND1P6-201ENST00000523621 946 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.42□□□□□ -1.38
COL20A1Q9P218 AC139697.1-201ENST00000548429 745 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.42□□□□□ -1.38
COL20A1Q9P218 AL121839.1-201ENST00000556233 1185 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 AGGF1P7-201ENST00000562369 913 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.42□□□□□ -1.38
COL20A1Q9P218 AC090330.1-201ENST00000588646 764 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 FKBP1AP1-201ENST00000594588 318 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms