Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 GABARAPL3-201ENST00000412799 354 ntBASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 AL354868.1-201ENST00000417077 482 ntBASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 FAM204CP-201ENST00000424489 642 ntBASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 RIMKLBP2-201ENST00000424737 654 ntBASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 AKR1B10P1-201ENST00000425765 942 ntBASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 AC079807.1-201ENST00000429993 481 ntBASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 PCNPP2-201ENST00000441651 455 ntBASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 AC019185.1-201ENST00000442718 389 ntBASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 RPL36AP39-201ENST00000445859 318 ntBASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 AC108157.1-201ENST00000510511 539 ntBASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 ASNSP4-201ENST00000511103 447 ntBASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 ACTR6P1-201ENST00000514311 1104 ntBASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 AC111000.6-201ENST00000514471 709 ntBASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 MRPS21P7-201ENST00000566937 238 ntBASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 PPATP2-201ENST00000605635 508 ntBASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 RNA5SP440-201ENST00000612665 119 ntBASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 AC239868.2-201ENST00000564237 4527 ntBASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 AC007938.2-201ENST00000604666 2634 ntBASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 CASC19-281ENST00000642118 1554 ntBASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 AL031985.1-201ENST00000392713 418 ntBASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 GAPDHP42-201ENST00000406848 981 ntBASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 SNORA11.5-201ENST00000408163 128 ntBASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 OR6E1P-201ENST00000414424 923 ntBASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 AL158827.1-201ENST00000416300 391 ntBASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 BTF3P9-201ENST00000418784 283 ntBASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 AL606490.7-201ENST00000433136 191 ntBASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 NDUFB4P8-201ENST00000435351 367 ntBASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 AL450996.1-201ENST00000445574 1202 ntBASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 HMGN1P36-201ENST00000446623 298 ntBASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 LARP7P4-201ENST00000481075 878 ntBASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 AC074087.1-201ENST00000512059 724 ntBASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 AC109635.6-201ENST00000525487 1113 ntBASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 AC012414.2-201ENST00000559474 187 ntBASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 AC092868.3-201ENST00000560515 784 ntBASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 AP004372.1-201ENST00000604842 844 ntBASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 MIR6861-201ENST00000618657 64 ntBASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 AC074140.1-201ENST00000621617 208 ntBASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 AL118508.4-201ENST00000624142 1176 ntBASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
BLOC1S4Q9NUP1 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 AC144833.1-201ENST00000567953 4089 ntBASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms