Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSU72Q9NP77 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSU72Q9NP77 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSU72Q9NP77 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSU72Q9NP77 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSU72Q9NP77 Y_RNA.813-201ENST00000364639 102 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSU72Q9NP77 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSU72Q9NP77 NRBF2P2-201ENST00000413087 861 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SSU72Q9NP77 AC239367.3-201ENST00000428996 814 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 CNOT7P1-201ENST00000429006 852 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 RPSAP32-201ENST00000432681 526 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 AC008072.1-201ENST00000434254 824 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSU72Q9NP77 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 AL592447.1-201ENST00000447592 540 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 EPS15P1-201ENST00000448836 336 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 RPL36AP33-201ENST00000450395 310 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 ELOCP23-201ENST00000452014 332 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 AL035407.2-201ENST00000454090 378 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 RPLP0P1-201ENST00000457002 361 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 AC041039.1-201ENST00000485656 536 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 RPL37-205ENST00000509877 637 ntTSL 5 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 AC114781.4-201ENST00000513707 639 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 NPM1P6-201ENST00000521088 871 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 AP001207.1-201ENST00000524051 481 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 OR5AK3P-201ENST00000527486 1297 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSU72Q9NP77 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 AC004825.1-201ENST00000555068 586 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 OR11J2P-201ENST00000555298 907 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 AC044913.1-201ENST00000557200 430 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 BNIP3P33-201ENST00000598912 569 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 AC015871.2-201ENST00000603605 948 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSU72Q9NP77 AL132821.1-201ENST00000616029 394 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 AL356321.1-201ENST00000621360 228 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 AC012414.7-202ENST00000622705 1090 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 RPL23AP61-201ENST00000623642 466 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 AC116618.1-201ENST00000634617 774 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSU72Q9NP77 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSU72Q9NP77 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSU72Q9NP77 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 AL513523.1-201ENST00000417868 1309 ntBASIC6.73□□□□□ -1.33
SSU72Q9NP77 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSU72Q9NP77 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SSU72Q9NP77 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SSU72Q9NP77 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
SSU72Q9NP77 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 SNX18P3-202ENST00000565670 1750 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SSU72Q9NP77 MTND4P23-201ENST00000447723 1363 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SSU72Q9NP77 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 AC102941.1-201ENST00000567616 1537 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC6.72□□□□□ -1.33
SSU72Q9NP77 SUGT1P2-201ENST00000379452 992 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 AC090114.1-201ENST00000393266 448 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 AL050335.1-201ENST00000396909 869 ntBASIC6.72□□□□□ -1.33
SSU72Q9NP77 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SSU72Q9NP77 AL121977.1-201ENST00000401636 979 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms