Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 Y_RNA.667-201ENST00000516212 107 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 AC136777.2-201ENST00000522979 358 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 AC091078.2-201ENST00000557145 559 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 GARSP1-201ENST00000570895 719 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 AC005244.1-201ENST00000582566 339 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 AL133247.2-201ENST00000603236 482 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 AL021918.2-201ENST00000613415 194 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 AC096708.4-201ENST00000620563 552 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 AC079298.2-201ENST00000623885 459 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 AC007683.2-201ENST00000624681 714 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 AC006927.4-201ENST00000639187 543 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 AL355488.2-201ENST00000609909 2850 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 CR382285.2-201ENST00000624662 1495 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 RNA5SP273-201ENST00000362484 113 ntBASIC6.01□□□□□ -1.45
USP29Q9HBJ7 RNU6-697P-201ENST00000363348 107 ntBASIC6.01□□□□□ -1.45
USP29Q9HBJ7 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 RPS3AP2-201ENST00000407190 754 ntBASIC6.01□□□□□ -1.45
USP29Q9HBJ7 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 RN7SKP17-201ENST00000411242 351 ntBASIC6.01□□□□□ -1.45
USP29Q9HBJ7 SDHDP6-201ENST00000414693 480 ntBASIC6.01□□□□□ -1.45
USP29Q9HBJ7 METTL15P3-201ENST00000415522 1221 ntBASIC6.01□□□□□ -1.45
USP29Q9HBJ7 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 BX284632.2-201ENST00000421091 399 ntBASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AL354766.1-201ENST00000423396 542 ntBASIC6.01□□□□□ -1.45
USP29Q9HBJ7 MTCO1P45-201ENST00000431457 267 ntBASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 ZNF965P-201ENST00000432501 817 ntBASIC6.01□□□□□ -1.45
USP29Q9HBJ7 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 VN1R110P-201ENST00000438988 971 ntBASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 GEMIN2P1-201ENST00000454246 752 ntBASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AL157777.1-201ENST00000468100 304 ntBASIC6.01□□□□□ -1.45
USP29Q9HBJ7 RN7SL273P-201ENST00000481561 299 ntBASIC6.01□□□□□ -1.45
USP29Q9HBJ7 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AP000648.1-201ENST00000529682 397 ntBASIC6.01□□□□□ -1.45
USP29Q9HBJ7 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AC007448.1-201ENST00000582714 234 ntBASIC6.01□□□□□ -1.45
USP29Q9HBJ7 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AL031601.1-201ENST00000605702 394 ntBASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AC126175.1-201ENST00000617041 758 ntBASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AC109809.1-201ENST00000619665 545 ntBASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AC095038.2-201ENST00000621464 1070 ntBASIC6.01□□□□□ -1.45
USP29Q9HBJ7 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AC008993.2-201ENST00000631744 806 ntBASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AL356118.1-201ENST00000635272 1078 ntBASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.01□□□□□ -1.45
USP29Q9HBJ7 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USP29Q9HBJ7 AC004158.1-201ENST00000564508 4319 ntBASIC6.01□□□□□ -1.45
USP29Q9HBJ7 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6□□□□□ -1.45
USP29Q9HBJ7 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6□□□□□ -1.45
USP29Q9HBJ7 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6□□□□□ -1.45
USP29Q9HBJ7 AL627171.1-201ENST00000618845 1308 ntBASIC6□□□□□ -1.45
USP29Q9HBJ7 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
USP29Q9HBJ7 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6□□□□□ -1.45
USP29Q9HBJ7 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USP29Q9HBJ7 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms