Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RPL7P58-201ENST00000402913 758 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 RPL12P23-201ENST00000405880 490 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 FCF1P9-201ENST00000412546 282 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 SPATA20P1-201ENST00000423089 438 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AC012519.1-201ENST00000424588 610 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AP003385.1-201ENST00000426387 893 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 RPL34P27-201ENST00000428810 349 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 Z68868.1-201ENST00000429048 544 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 MRPS21P3-201ENST00000436696 262 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 RAB28P3-201ENST00000448325 597 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 MRPL42P4-201ENST00000453267 443 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 RPL31P11-202ENST00000454082 372 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AC084754.1-201ENST00000463466 464 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 RN7SL37P-201ENST00000490461 307 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AC092045.1-201ENST00000495716 1231 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 SNORA58-201ENST00000505219 137 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 Y_RNA.695-201ENST00000516715 107 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 IGHV3-57-201ENST00000520143 280 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AC007068.2-201ENST00000543168 395 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AC010198.2-201ENST00000550612 259 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 OR11H3P-201ENST00000554547 982 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 ANP32BP1-202ENST00000568553 737 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AC125494.3-201ENST00000602759 455 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AC005479.3-201ENST00000602790 431 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AL049840.5-201ENST00000602827 552 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AC108747.1-201ENST00000609508 535 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 U6atac.1-201ENST00000616025 117 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AC121761.2-201ENST00000617300 689 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AL133370.2-201ENST00000619934 439 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AL359757.1-201ENST00000623176 255 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AL356121.2-201ENST00000624715 780 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 FP325313.1-201ENST00000638228 703 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 FANCD2P2-201ENST00000437591 1400 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 TTC41P-205ENST00000551270 3963 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AP002370.1-201ENST00000528055 1602 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC023245.2-201ENST00000530760 2978 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 ZNF402P-201ENST00000404435 3100 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 MAPK10-357ENST00000641831 2858 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 RNU1-46P-201ENST00000384425 164 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 RNU6-932P-201ENST00000391108 106 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 MIR1266-201ENST00000408125 84 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 RN7SKP273-201ENST00000411392 314 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC006960.1-201ENST00000419980 153 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms