Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 MIR3154-201ENST00000577829 84 ntBASIC5.35□□□□□ -1.55
CLIP4Q8N3C7 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CLIP4Q8N3C7 COX6CP7-201ENST00000597056 208 ntBASIC5.35□□□□□ -1.55
CLIP4Q8N3C7 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.35□□□□□ -1.55
CLIP4Q8N3C7 AC133794.1-201ENST00000602731 914 ntBASIC5.35□□□□□ -1.55
CLIP4Q8N3C7 AL158050.2-201ENST00000605336 568 ntBASIC5.35□□□□□ -1.55
CLIP4Q8N3C7 AL450270.1-201ENST00000606160 391 ntBASIC5.35□□□□□ -1.55
CLIP4Q8N3C7 AL136131.3-201ENST00000607600 188 ntBASIC5.35□□□□□ -1.55
CLIP4Q8N3C7 AL356752.1-201ENST00000615844 593 ntBASIC5.35□□□□□ -1.55
CLIP4Q8N3C7 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.35□□□□□ -1.55
CLIP4Q8N3C7 AC074276.2-201ENST00000619891 348 ntBASIC5.35□□□□□ -1.55
CLIP4Q8N3C7 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.35□□□□□ -1.55
CLIP4Q8N3C7 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.35□□□□□ -1.55
CLIP4Q8N3C7 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.35□□□□□ -1.55
CLIP4Q8N3C7 AC022400.9-201ENST00000623633 273 ntBASIC5.35□□□□□ -1.55
CLIP4Q8N3C7 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.35□□□□□ -1.55
CLIP4Q8N3C7 AL445984.1-201ENST00000637834 659 ntBASIC5.35□□□□□ -1.55
CLIP4Q8N3C7 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.35□□□□□ -1.55
CLIP4Q8N3C7 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLIP4Q8N3C7 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CLIP4Q8N3C7 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CLIP4Q8N3C7 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AL158152.1-201ENST00000602652 1435 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 ATP5F1P6-201ENST00000402768 767 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AC016739.1-201ENST00000405359 345 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 RNA5SP431-201ENST00000410312 120 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 RN7SKP279-201ENST00000411383 298 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AL121882.1-201ENST00000422893 417 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AC011242.1-201ENST00000433596 1158 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 GAPDHP48-201ENST00000436626 961 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 OFD1P3Y-201ENST00000453312 783 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 YRDCP3-201ENST00000456507 480 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 CST12P-201ENST00000457644 362 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AC009963.3-201ENST00000458090 486 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AC023194.2-201ENST00000465398 406 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AC114322.1-201ENST00000506771 926 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AC105384.2-201ENST00000508433 640 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 RNA5SP230-201ENST00000517039 122 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AC084121.1-201ENST00000533882 835 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AC068993.1-201ENST00000546724 589 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 CKS1BP1-201ENST00000555221 240 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AC006530.1-201ENST00000555980 571 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AL845552.1-201ENST00000556820 323 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 DPPA3P2-202ENST00000557188 1219 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 MIR4776-2-201ENST00000580204 80 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AC090236.2-201ENST00000587933 1101 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AP001437.1-201ENST00000608783 456 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AC245014.3-201ENST00000618589 347 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AP000943.4-201ENST00000622912 357 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AL683826.1-201ENST00000624104 627 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 OR4G3P-201ENST00000633500 913 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 CASC19-274ENST00000642018 970 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 AC104964.3-201ENST00000606115 2860 ntBASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CLIP4Q8N3C7 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CLIP4Q8N3C7 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CLIP4Q8N3C7 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
CLIP4Q8N3C7 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.34□□□□□ -1.56
CLIP4Q8N3C7 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
CLIP4Q8N3C7 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
CLIP4Q8N3C7 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms