Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 AL133388.1-201ENST00000404509 287 ntBASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 AL390774.1-201ENST00000411924 246 ntBASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 RPL35AP24-201ENST00000413846 330 ntBASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 RPL12P17-201ENST00000432393 498 ntBASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 RPS26P41-201ENST00000450370 284 ntBASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 AL035090.1-201ENST00000454835 332 ntBASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 AC091917.2-201ENST00000505002 744 ntBASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 AC091912.1-201ENST00000511351 248 ntBASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 NPM1P21-201ENST00000513394 762 ntBASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 AC111000.6-201ENST00000514471 709 ntBASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 AP004607.2-201ENST00000533949 322 ntBASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 AC126177.5-201ENST00000549599 178 ntBASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 OR11H3P-201ENST00000554547 982 ntBASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 AC135068.5-201ENST00000624197 983 ntBASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 AC136428.4-201ENST00000634254 1155 ntBASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 AC007938.2-201ENST00000604666 2634 ntBASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 AC016745.2-201ENST00000608834 3443 ntBASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 AL360270.2-201ENST00000562952 5985 ntBASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 AC233968.1-201ENST00000611212 1300 ntBASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 AC092681.1-201ENST00000297369 291 ntBASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 SNORA5.1-201ENST00000384275 131 ntBASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 RNA5SP339-201ENST00000390987 122 ntBASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 HMGN2P27-201ENST00000427352 270 ntBASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 DSTNP5-201ENST00000427921 523 ntBASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 AC138761.5-201ENST00000433967 325 ntBASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 NDUFB4P8-201ENST00000435351 367 ntBASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 AC018638.3-201ENST00000461273 132 ntBASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 PSAT1P4-201ENST00000466500 526 ntBASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 OR8G3P-201ENST00000533406 921 ntBASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 OR51C1P-201ENST00000608504 942 ntBASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 AL512624.1-201ENST00000613638 469 ntBASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 CASC19-264ENST00000641912 1184 ntBASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 AC006600.2-201ENST00000624834 2506 ntBASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
C9orf40Q8IXQ3 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
C9orf40Q8IXQ3 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.01□□□□□ -1.61
C9orf40Q8IXQ3 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms