Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC113139.1-201ENST00000605049 239 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 AC026108.1-201ENST00000635444 547 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 CDY7P-201ENST00000429883 1604 ntBASIC7.6□□□□□ -1.19
NPAS3Q8IXF0 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AC092646.2-201ENST00000431242 2095 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AC006511.3-201ENST00000624929 1783 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AC009948.5-201ENST00000624360 4406 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AP000766.1-201ENST00000561746 4140 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AC008937.3-201ENST00000606813 1700 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 OR56A4-201ENST00000330728 1209 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 Y_RNA.72-201ENST00000362894 103 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 RNU6-878P-201ENST00000384578 110 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AMD1P2-201ENST00000412936 992 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 TIMM9P3-201ENST00000428659 274 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AL954705.1-201ENST00000435277 559 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 ARL5AP3-201ENST00000439327 386 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 SDCBPP1-201ENST00000440192 890 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 RPL39P6-201ENST00000448289 150 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 PDSS1P2-201ENST00000449397 678 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AC090096.1-201ENST00000489168 390 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 RN7SL306P-201ENST00000492941 296 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 OR7E99P-201ENST00000505750 922 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AC010486.1-201ENST00000511793 424 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 CARSP2-201ENST00000520688 277 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AP001803.1-201ENST00000525668 147 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AC239860.2-201ENST00000525886 270 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AC005000.1-201ENST00000536192 288 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 MIR5708-201ENST00000579723 85 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 WDR45BP1-201ENST00000583470 1029 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 SNX29P2-204ENST00000603801 875 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AC016405.2-201ENST00000607393 312 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AC005753.1-201ENST00000623837 618 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 MIR665-201ENST00000635949 72 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 AC117529.2-201ENST00000512159 2068 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 RARSP1-201ENST00000542842 1418 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 OR5M2P-202ENST00000641241 4242 ntBASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPAS3Q8IXF0 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC7.59□□□□□ -1.2
NPAS3Q8IXF0 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.2
NPAS3Q8IXF0 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
NPAS3Q8IXF0 AP003471.1-202ENST00000319051 1988 ntBASIC7.59□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms