Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 ATP5A1P10-201ENST00000622403 1603 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 RNU6-1322P-201ENST00000364309 107 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 RNU1-16P-201ENST00000365477 164 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 Y_RNA.579-201ENST00000390939 94 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AC092952.1-201ENST00000397646 1209 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AL356967.1-201ENST00000406305 431 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 RPSAP72-201ENST00000407020 358 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 U3.31-201ENST00000408113 216 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 Y_RNA.605-201ENST00000410577 105 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 RNU6-373P-201ENST00000411247 98 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AL359704.1-201ENST00000411586 781 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 RPL7P54-201ENST00000438336 674 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 PA2G4P1-201ENST00000442248 1197 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AC023274.2-201ENST00000445264 521 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 DNAJB5P1-201ENST00000454004 806 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 Y_RNA.639-201ENST00000458981 102 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AC091564.1-201ENST00000464563 479 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 CREM-234ENST00000484283 660 ntTSL 5 BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 RPL34P33-201ENST00000486062 334 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 PTP4A1P4-201ENST00000512479 322 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 RNY4P37-201ENST00000516225 96 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 RNA5SP287-201ENST00000516358 103 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AC100823.2-201ENST00000518337 699 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 COX6CP5-201ENST00000527162 228 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AL845331.3-202ENST00000562856 261 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 NRBF2P1-201ENST00000587407 859 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AL512605.2-201ENST00000592972 256 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AC245014.2-201ENST00000603689 287 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AL021918.1-201ENST00000603933 236 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AC016925.2-201ENST00000605108 242 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AC246785.4-201ENST00000605374 287 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AC068722.2-201ENST00000618734 544 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AC129778.1-202ENST00000623812 261 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AL591379.1-207ENST00000635982 261 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AMYH02020865.1-205ENST00000636189 261 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AC016582.3-206ENST00000636547 207 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AC074198.1-201ENST00000506546 1397 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AC073342.2-201ENST00000595842 1800 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 MTND4P1-201ENST00000457501 1466 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 ENO1P4-201ENST00000416471 1785 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 RPL12P38-202ENST00000588627 2319 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 MAPK10-281ENST00000641170 3070 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 AC010928.1-201ENST00000592477 1447 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 HSPD1P1-201ENST00000503199 1726 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 AF131215.2-201ENST00000531549 1710 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 RNU6-1309P-201ENST00000363305 108 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 RNU6-639P-201ENST00000384074 107 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 HMGB3P1-201ENST00000393368 573 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 RPL23AP29-201ENST00000397284 453 ntBASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC8.04□□□□□ -1.12
SCUBE3Q8IX30 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms