Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 AC079905.1-201ENST00000549280 475 ntBASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 LSM3P2-201ENST00000551246 273 ntBASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 DPPA2P4-201ENST00000563717 878 ntBASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 MIR3154-201ENST00000577829 84 ntBASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 AP003400.3-201ENST00000624904 346 ntBASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 OR8G3P-202ENST00000641572 1255 ntBASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
NUDCD3Q8IVD9 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
NUDCD3Q8IVD9 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.34□□□□□ -1.56
NUDCD3Q8IVD9 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.34□□□□□ -1.56
NUDCD3Q8IVD9 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
NUDCD3Q8IVD9 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 CDC27P2-201ENST00000425026 1922 ntBASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 RNU1-150P-201ENST00000362491 162 ntBASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 RN7SKP6-201ENST00000364795 319 ntBASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 RNA5SP131-201ENST00000365452 119 ntBASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 MIR1203-201ENST00000408812 85 ntBASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 AL035660.1-201ENST00000422041 222 ntBASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 BX119321.1-201ENST00000428912 797 ntBASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 AC124944.2-201ENST00000429866 1242 ntBASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 AP000547.1-201ENST00000454360 617 ntBASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 RN7SL273P-201ENST00000481561 299 ntBASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 HSD3BP3-201ENST00000514706 994 ntBASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 CYCSP38-201ENST00000559840 322 ntBASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 AC009027.1-201ENST00000604510 479 ntBASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 RN7SL544P-201ENST00000617232 284 ntBASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 AC109583.2-201ENST00000617367 129 ntBASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 AP005431.1-201ENST00000618479 319 ntBASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 MIR6839-201ENST00000620425 113 ntBASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 RN7SL763P-201ENST00000620922 284 ntBASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.33□□□□□ -1.56
NUDCD3Q8IVD9 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 RNA5SP477-201ENST00000362639 119 ntBASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 DBIP1-201ENST00000401435 260 ntBASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 AC002524.1-201ENST00000411687 547 ntBASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 CLNS1AP1-201ENST00000435954 682 ntBASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 CYCSP24-201ENST00000445119 316 ntBASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 EEF1B2P3-201ENST00000447718 678 ntBASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 RPS23P6-201ENST00000466136 431 ntBASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 AC092754.1-201ENST00000472975 479 ntBASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 AC023424.1-201ENST00000496058 459 ntBASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 NIFKP7-201ENST00000503365 834 ntBASIC5.32□□□□□ -1.56
NUDCD3Q8IVD9 AC092349.1-201ENST00000504903 310 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms