Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDS5AQ29RF7 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDS5AQ29RF7 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.48□□□□□ -1.37
PDS5AQ29RF7 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDS5AQ29RF7 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDS5AQ29RF7 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
PDS5AQ29RF7 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.48□□□□□ -1.37
PDS5AQ29RF7 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDS5AQ29RF7 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.48□□□□□ -1.37
PDS5AQ29RF7 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.48□□□□□ -1.37
PDS5AQ29RF7 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDS5AQ29RF7 PANDAR-201ENST00000629595 1506 ntBASIC6.48□□□□□ -1.37
PDS5AQ29RF7 AC144833.1-201ENST00000567953 4089 ntBASIC6.48□□□□□ -1.37
PDS5AQ29RF7 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDS5AQ29RF7 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.48□□□□□ -1.37
PDS5AQ29RF7 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
PDS5AQ29RF7 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDS5AQ29RF7 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.48□□□□□ -1.37
PDS5AQ29RF7 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.48□□□□□ -1.37
PDS5AQ29RF7 Z92846.1-201ENST00000456203 268 ntBASIC6.48□□□□□ -1.37
PDS5AQ29RF7 AC007688.1-201ENST00000475592 759 ntBASIC6.48□□□□□ -1.37
PDS5AQ29RF7 RPL32P9-201ENST00000487963 407 ntBASIC6.48□□□□□ -1.37
PDS5AQ29RF7 AC231760.1-201ENST00000498002 260 ntBASIC6.48□□□□□ -1.37
PDS5AQ29RF7 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.48□□□□□ -1.37
PDS5AQ29RF7 OR5M14P-201ENST00000506803 618 ntBASIC6.48□□□□□ -1.37
PDS5AQ29RF7 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.48□□□□□ -1.37
PDS5AQ29RF7 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.48□□□□□ -1.37
PDS5AQ29RF7 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.48□□□□□ -1.37
PDS5AQ29RF7 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.48□□□□□ -1.37
PDS5AQ29RF7 AC115989.2-201ENST00000578640 563 ntBASIC6.48□□□□□ -1.37
PDS5AQ29RF7 AC011447.4-201ENST00000587562 111 ntBASIC6.48□□□□□ -1.37
PDS5AQ29RF7 AC010809.3-201ENST00000621310 641 ntBASIC6.48□□□□□ -1.37
PDS5AQ29RF7 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
PDS5AQ29RF7 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDS5AQ29RF7 AL031123.3-201ENST00000623345 1837 ntBASIC6.47□□□□□ -1.37
PDS5AQ29RF7 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 MRRFP1-201ENST00000435941 1675 ntBASIC6.47□□□□□ -1.37
PDS5AQ29RF7 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 RNU1-43P-201ENST00000365052 165 ntBASIC6.47□□□□□ -1.37
PDS5AQ29RF7 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 PPIAP9-201ENST00000403866 498 ntBASIC6.47□□□□□ -1.37
PDS5AQ29RF7 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 RPSAP50-201ENST00000481955 852 ntBASIC6.47□□□□□ -1.37
PDS5AQ29RF7 AC058823.1-201ENST00000485315 474 ntBASIC6.47□□□□□ -1.37
PDS5AQ29RF7 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 AC006116.3-201ENST00000592968 361 ntBASIC6.47□□□□□ -1.37
PDS5AQ29RF7 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 AC092944.2-201ENST00000605443 889 ntBASIC6.47□□□□□ -1.37
PDS5AQ29RF7 AL356608.1-201ENST00000610034 820 ntBASIC6.47□□□□□ -1.37
PDS5AQ29RF7 AL354950.1-201ENST00000614150 568 ntBASIC6.47□□□□□ -1.37
PDS5AQ29RF7 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDS5AQ29RF7 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.37
PDS5AQ29RF7 AC097634.1-201ENST00000604491 2467 ntBASIC6.46□□□□□ -1.37
PDS5AQ29RF7 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.46□□□□□ -1.37
PDS5AQ29RF7 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.46□□□□□ -1.37
PDS5AQ29RF7 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PDS5AQ29RF7 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PDS5AQ29RF7 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PDS5AQ29RF7 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PDS5AQ29RF7 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
PDS5AQ29RF7 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PDS5AQ29RF7 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDS5AQ29RF7 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PDS5AQ29RF7 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
PDS5AQ29RF7 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.46□□□□□ -1.38
PDS5AQ29RF7 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
PDS5AQ29RF7 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.46□□□□□ -1.38
PDS5AQ29RF7 RPL23P2-201ENST00000320371 421 ntBASIC6.46□□□□□ -1.38
PDS5AQ29RF7 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.46□□□□□ -1.38
PDS5AQ29RF7 RFESDP1-201ENST00000422350 461 ntBASIC6.46□□□□□ -1.38
PDS5AQ29RF7 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PDS5AQ29RF7 OR6C71P-201ENST00000432580 913 ntBASIC6.46□□□□□ -1.38
PDS5AQ29RF7 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.46□□□□□ -1.38
PDS5AQ29RF7 AC009963.4-201ENST00000448535 339 ntBASIC6.46□□□□□ -1.38
PDS5AQ29RF7 AC104634.1-201ENST00000452720 462 ntBASIC6.46□□□□□ -1.38
PDS5AQ29RF7 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.46□□□□□ -1.38
PDS5AQ29RF7 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.46□□□□□ -1.38
PDS5AQ29RF7 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.46□□□□□ -1.38
PDS5AQ29RF7 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms