Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC100810.3-201ENST00000633189 2240 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
PCDH1Q08174 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDH1Q08174 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PCDH1Q08174 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDH1Q08174 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.85□□□□□ -1.31
PCDH1Q08174 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDH1Q08174 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDH1Q08174 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC6.85□□□□□ -1.31
PCDH1Q08174 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.85□□□□□ -1.31
PCDH1Q08174 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PCDH1Q08174 AC092646.2-201ENST00000431242 2095 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDH1Q08174 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PCDH1Q08174 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PCDH1Q08174 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.85□□□□□ -1.31
PCDH1Q08174 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
PCDH1Q08174 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDH1Q08174 SNORA72.1-201ENST00000363485 129 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 RNA5SP472-201ENST00000363868 119 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 RNU6-660P-201ENST00000364566 109 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 Y_RNA.302-201ENST00000364997 102 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PCDH1Q08174 Y_RNA.408-201ENST00000383987 102 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 CYCSP45-201ENST00000402289 315 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC6.85□□□□□ -1.31
PCDH1Q08174 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.85□□□□□ -1.31
PCDH1Q08174 RPSAP1-201ENST00000421328 880 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 AC009480.2-201ENST00000422916 432 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC6.85□□□□□ -1.31
PCDH1Q08174 GAPDHP34-201ENST00000432112 823 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 AL050321.1-201ENST00000432363 400 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 AC091390.2-201ENST00000432573 374 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 HMGB1P31-201ENST00000437242 427 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 AL512286.1-201ENST00000439244 400 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 RPS26P30-201ENST00000443431 335 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 VN1R10P-201ENST00000447106 875 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 TPT1P14-201ENST00000448018 505 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.85□□□□□ -1.31
PCDH1Q08174 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.85□□□□□ -1.31
PCDH1Q08174 AC026254.2-201ENST00000475295 371 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 AC079841.1-201ENST00000481228 950 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 VPS26AP1-201ENST00000483197 979 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC6.85□□□□□ -1.31
PCDH1Q08174 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.85□□□□□ -1.31
PCDH1Q08174 AC079594.1-201ENST00000489757 331 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 AC122714.1-201ENST00000502510 459 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 RNU6-1225P-201ENST00000516336 65 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.85□□□□□ -1.31
PCDH1Q08174 AP003084.1-201ENST00000524828 742 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 OR5M4P-201ENST00000529436 925 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
PCDH1Q08174 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PCDH1Q08174 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC6.85□□□□□ -1.31
PCDH1Q08174 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.85□□□□□ -1.31
PCDH1Q08174 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.85□□□□□ -1.31
PCDH1Q08174 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
PCDH1Q08174 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.85□□□□□ -1.31
PCDH1Q08174 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.85□□□□□ -1.31
PCDH1Q08174 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PCDH1Q08174 GTF2IP22-201ENST00000554443 182 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6.85□□□□□ -1.31
PCDH1Q08174 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC6.85□□□□□ -1.31
PCDH1Q08174 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.85□□□□□ -1.31
PCDH1Q08174 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.85□□□□□ -1.31
PCDH1Q08174 AC061975.3-201ENST00000583209 244 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 MIR4786-201ENST00000583954 80 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.85□□□□□ -1.31
PCDH1Q08174 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 AC012065.4-201ENST00000602445 679 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 AC011453.2-201ENST00000603737 729 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC6.85□□□□□ -1.31
PCDH1Q08174 AC104184.1-201ENST00000607513 721 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
PCDH1Q08174 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 CR381653.2-201ENST00000624041 768 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC6.85□□□□□ -1.31
PCDH1Q08174 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
PCDH1Q08174 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDH1Q08174 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDH1Q08174 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDH1Q08174 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
PCDH1Q08174 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC6.85□□□□□ -1.31
PCDH1Q08174 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.85□□□□□ -1.31
PCDH1Q08174 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PCDH1Q08174 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDH1Q08174 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
PCDH1Q08174 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
PCDH1Q08174 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDH1Q08174 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PCDH1Q08174 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDH1Q08174 EED-206ENST00000527888 1422 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDH1Q08174 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDH1Q08174 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.84□□□□□ -1.31
PCDH1Q08174 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDH1Q08174 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDH1Q08174 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDH1Q08174 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.84□□□□□ -1.31
PCDH1Q08174 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDH1Q08174 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms