Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC079600.1-201ENST00000550326 297 ntBASIC5.34□□□□□ -1.55
LTBQ06643 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.34□□□□□ -1.55
LTBQ06643 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.34□□□□□ -1.55
LTBQ06643 AC007346.2-201ENST00000564816 892 ntBASIC5.34□□□□□ -1.55
LTBQ06643 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.34□□□□□ -1.55
LTBQ06643 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.34□□□□□ -1.55
LTBQ06643 RN7SL339P-201ENST00000580597 296 ntBASIC5.34□□□□□ -1.55
LTBQ06643 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.34□□□□□ -1.55
LTBQ06643 ZNF92P2-201ENST00000600543 1059 ntBASIC5.34□□□□□ -1.55
LTBQ06643 AC112220.2-201ENST00000605513 533 ntBASIC5.34□□□□□ -1.55
LTBQ06643 MIR6809-201ENST00000612189 116 ntBASIC5.34□□□□□ -1.55
LTBQ06643 AL021918.2-201ENST00000613415 194 ntBASIC5.34□□□□□ -1.55
LTBQ06643 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.34□□□□□ -1.55
LTBQ06643 AL445493.3-201ENST00000619568 477 ntBASIC5.34□□□□□ -1.55
LTBQ06643 AC096708.4-201ENST00000620563 552 ntBASIC5.34□□□□□ -1.55
LTBQ06643 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.34□□□□□ -1.55
LTBQ06643 AC099654.9-201ENST00000637055 678 ntBASIC5.34□□□□□ -1.55
LTBQ06643 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LTBQ06643 AC239868.2-201ENST00000564237 4527 ntBASIC5.34□□□□□ -1.55
LTBQ06643 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.34□□□□□ -1.55
LTBQ06643 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.55
LTBQ06643 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LTBQ06643 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LTBQ06643 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
LTBQ06643 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.34□□□□□ -1.55
LTBQ06643 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
LTBQ06643 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
LTBQ06643 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
LTBQ06643 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
LTBQ06643 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.34□□□□□ -1.56
LTBQ06643 CASC19-261ENST00000641853 1638 ntBASIC5.34□□□□□ -1.56
LTBQ06643 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LTBQ06643 Z95114.1-201ENST00000624264 14574 ntBASIC5.33□□□□□ -1.56
LTBQ06643 AC120036.2-201ENST00000509729 1474 ntBASIC5.33□□□□□ -1.56
LTBQ06643 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LTBQ06643 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LTBQ06643 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.33□□□□□ -1.56
LTBQ06643 SAMMSON-210ENST00000641260 1308 ntBASIC5.33□□□□□ -1.56
LTBQ06643 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.33□□□□□ -1.56
LTBQ06643 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
LTBQ06643 OR4K17-201ENST00000315543 1032 ntBASIC5.33□□□□□ -1.56
LTBQ06643 SELENOWP1-201ENST00000322792 252 ntBASIC5.33□□□□□ -1.56
LTBQ06643 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
LTBQ06643 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.33□□□□□ -1.56
LTBQ06643 OR3A2-201ENST00000408891 1076 ntBASIC5.33□□□□□ -1.56
LTBQ06643 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.33□□□□□ -1.56
LTBQ06643 AL354890.1-201ENST00000413730 346 ntBASIC5.33□□□□□ -1.56
LTBQ06643 SSR1P2-201ENST00000415208 787 ntBASIC5.33□□□□□ -1.56
LTBQ06643 AL354868.1-201ENST00000417077 482 ntBASIC5.33□□□□□ -1.56
LTBQ06643 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.33□□□□□ -1.56
LTBQ06643 RPS4XP5-201ENST00000419038 768 ntBASIC5.33□□□□□ -1.56
LTBQ06643 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.33□□□□□ -1.56
LTBQ06643 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.33□□□□□ -1.56
LTBQ06643 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.33□□□□□ -1.56
LTBQ06643 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.33□□□□□ -1.56
LTBQ06643 AC092017.2-201ENST00000427600 362 ntBASIC5.33□□□□□ -1.56
LTBQ06643 GAPDHP75-201ENST00000433910 943 ntBASIC5.33□□□□□ -1.56
LTBQ06643 ELOCP3-201ENST00000439303 348 ntBASIC5.33□□□□□ -1.56
LTBQ06643 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LTBQ06643 AL451063.1-201ENST00000450164 1133 ntBASIC5.33□□□□□ -1.56
LTBQ06643 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.33□□□□□ -1.56
LTBQ06643 RPL31P53-201ENST00000457065 348 ntBASIC5.33□□□□□ -1.56
LTBQ06643 RPS27AP2-201ENST00000457576 465 ntBASIC5.33□□□□□ -1.56
LTBQ06643 AL139824.2-201ENST00000458731 1095 ntBASIC5.33□□□□□ -1.56
LTBQ06643 AC023245.1-201ENST00000468501 517 ntBASIC5.33□□□□□ -1.56
LTBQ06643 RN7SL799P-201ENST00000475891 298 ntBASIC5.33□□□□□ -1.56
LTBQ06643 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.33□□□□□ -1.56
LTBQ06643 AC096571.1-202ENST00000506634 735 ntBASIC5.33□□□□□ -1.56
LTBQ06643 AC093815.1-201ENST00000508637 280 ntBASIC5.33□□□□□ -1.56
LTBQ06643 AC114781.3-201ENST00000512083 142 ntBASIC5.33□□□□□ -1.56
LTBQ06643 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.33□□□□□ -1.56
LTBQ06643 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LTBQ06643 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.33□□□□□ -1.56
LTBQ06643 AC090424.1-201ENST00000535243 736 ntBASIC5.33□□□□□ -1.56
LTBQ06643 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.33□□□□□ -1.56
LTBQ06643 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.33□□□□□ -1.56
LTBQ06643 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.33□□□□□ -1.56
LTBQ06643 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
LTBQ06643 MTATP6P24-201ENST00000576835 677 ntBASIC5.33□□□□□ -1.56
LTBQ06643 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.33□□□□□ -1.56
LTBQ06643 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.33□□□□□ -1.56
LTBQ06643 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.33□□□□□ -1.56
LTBQ06643 AC140725.3-201ENST00000616193 880 ntBASIC5.33□□□□□ -1.56
LTBQ06643 AL163051.2-201ENST00000618976 735 ntBASIC5.33□□□□□ -1.56
LTBQ06643 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
LTBQ06643 AC018445.2-201ENST00000622987 260 ntBASIC5.33□□□□□ -1.56
LTBQ06643 AL356863.1-201ENST00000623378 1080 ntBASIC5.33□□□□□ -1.56
LTBQ06643 AC009039.2-201ENST00000624524 529 ntBASIC5.33□□□□□ -1.56
LTBQ06643 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.33□□□□□ -1.56
LTBQ06643 AC136428.4-201ENST00000634254 1155 ntBASIC5.33□□□□□ -1.56
LTBQ06643 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LTBQ06643 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.33□□□□□ -1.56
LTBQ06643 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.33□□□□□ -1.56
LTBQ06643 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LTBQ06643 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LTBQ06643 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
LTBQ06643 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LTBQ06643 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
LTBQ06643 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LTBQ06643 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms