Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 RPL19P16-201ENST00000433839 588 ntBASIC5.19□□□□□ -1.58
HMGCS1Q01581 AC002504.1-201ENST00000438281 691 ntBASIC5.19□□□□□ -1.58
HMGCS1Q01581 AC016724.1-201ENST00000453215 421 ntBASIC5.19□□□□□ -1.58
HMGCS1Q01581 CBX1P2-201ENST00000453841 458 ntBASIC5.19□□□□□ -1.58
HMGCS1Q01581 SETP20-201ENST00000457046 852 ntBASIC5.19□□□□□ -1.58
HMGCS1Q01581 AC092754.1-201ENST00000472975 479 ntBASIC5.19□□□□□ -1.58
HMGCS1Q01581 AC090589.1-201ENST00000473109 362 ntBASIC5.19□□□□□ -1.58
HMGCS1Q01581 AC093827.1-201ENST00000480094 861 ntBASIC5.19□□□□□ -1.58
HMGCS1Q01581 RN7SL273P-201ENST00000481561 299 ntBASIC5.19□□□□□ -1.58
HMGCS1Q01581 RPL7P51-201ENST00000490532 749 ntBASIC5.19□□□□□ -1.58
HMGCS1Q01581 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.19□□□□□ -1.58
HMGCS1Q01581 AC138866.2-201ENST00000508650 584 ntBASIC5.19□□□□□ -1.58
HMGCS1Q01581 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.19□□□□□ -1.58
HMGCS1Q01581 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.19□□□□□ -1.58
HMGCS1Q01581 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.19□□□□□ -1.58
HMGCS1Q01581 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.19□□□□□ -1.58
HMGCS1Q01581 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.19□□□□□ -1.58
HMGCS1Q01581 RN7SL787P-201ENST00000613000 284 ntBASIC5.19□□□□□ -1.58
HMGCS1Q01581 AC126175.1-201ENST00000617041 758 ntBASIC5.19□□□□□ -1.58
HMGCS1Q01581 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.19□□□□□ -1.58
HMGCS1Q01581 AL512356.3-201ENST00000623005 461 ntBASIC5.19□□□□□ -1.58
HMGCS1Q01581 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.19□□□□□ -1.58
HMGCS1Q01581 SNORA17.5-201ENST00000630429 132 ntBASIC5.19□□□□□ -1.58
HMGCS1Q01581 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HMGCS1Q01581 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCS1Q01581 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.19□□□□□ -1.58
HMGCS1Q01581 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
HMGCS1Q01581 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCS1Q01581 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.19□□□□□ -1.58
HMGCS1Q01581 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCS1Q01581 AC097063.1-201ENST00000426714 1797 ntBASIC5.19□□□□□ -1.58
HMGCS1Q01581 KARSP1-201ENST00000451871 1752 ntBASIC5.19□□□□□ -1.58
HMGCS1Q01581 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCS1Q01581 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.18□□□□□ -1.58
HMGCS1Q01581 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HMGCS1Q01581 AC112198.2-201ENST00000426589 6996 ntBASIC5.18□□□□□ -1.58
HMGCS1Q01581 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
HMGCS1Q01581 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.18□□□□□ -1.58
HMGCS1Q01581 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HMGCS1Q01581 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.18□□□□□ -1.58
HMGCS1Q01581 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HMGCS1Q01581 AC020633.1-201ENST00000468439 2247 ntBASIC5.18□□□□□ -1.58
HMGCS1Q01581 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HMGCS1Q01581 RNU6-673P-201ENST00000365084 104 ntBASIC5.18□□□□□ -1.58
HMGCS1Q01581 RNU4-2-201ENST00000365668 141 ntBASIC5.18□□□□□ -1.58
HMGCS1Q01581 OR1L6-202ENST00000373684 1044 ntBASIC5.18□□□□□ -1.58
HMGCS1Q01581 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.18□□□□□ -1.58
HMGCS1Q01581 TRAV35-201ENST00000390462 330 ntBASIC5.18□□□□□ -1.58
HMGCS1Q01581 RNA5SP178-201ENST00000410380 128 ntBASIC5.18□□□□□ -1.58
HMGCS1Q01581 RN7SKP286-201ENST00000410894 299 ntBASIC5.18□□□□□ -1.58
HMGCS1Q01581 BMS1P17-202ENST00000416720 316 ntBASIC5.18□□□□□ -1.58
HMGCS1Q01581 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.18□□□□□ -1.58
HMGCS1Q01581 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGCS1Q01581 AL136231.1-201ENST00000429407 730 ntBASIC5.18□□□□□ -1.58
HMGCS1Q01581 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGCS1Q01581 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HMGCS1Q01581 AL035090.1-201ENST00000454835 332 ntBASIC5.18□□□□□ -1.58
HMGCS1Q01581 RPS27AP2-201ENST00000457576 465 ntBASIC5.18□□□□□ -1.58
HMGCS1Q01581 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGCS1Q01581 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGCS1Q01581 IMPA1P1-201ENST00000510718 842 ntBASIC5.18□□□□□ -1.58
HMGCS1Q01581 RN7SKP99-201ENST00000517028 307 ntBASIC5.18□□□□□ -1.58
HMGCS1Q01581 TMEM97P2-201ENST00000517841 403 ntBASIC5.18□□□□□ -1.58
HMGCS1Q01581 AC021733.2-201ENST00000518830 497 ntBASIC5.18□□□□□ -1.58
HMGCS1Q01581 AP004607.2-201ENST00000533949 322 ntBASIC5.18□□□□□ -1.58
HMGCS1Q01581 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HMGCS1Q01581 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.18□□□□□ -1.58
HMGCS1Q01581 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGCS1Q01581 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGCS1Q01581 AL022394.1-201ENST00000606979 292 ntBASIC5.18□□□□□ -1.58
HMGCS1Q01581 RNA5SP440-201ENST00000612665 119 ntBASIC5.18□□□□□ -1.58
HMGCS1Q01581 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.18□□□□□ -1.58
HMGCS1Q01581 AC132068.1-201ENST00000623805 459 ntBASIC5.18□□□□□ -1.58
HMGCS1Q01581 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.18□□□□□ -1.58
HMGCS1Q01581 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HMGCS1Q01581 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HMGCS1Q01581 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HMGCS1Q01581 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HMGCS1Q01581 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HMGCS1Q01581 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.18□□□□□ -1.58
HMGCS1Q01581 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HMGCS1Q01581 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HMGCS1Q01581 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HMGCS1Q01581 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HMGCS1Q01581 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HMGCS1Q01581 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGCS1Q01581 LINC01963-201ENST00000562038 3148 ntBASIC5.17□□□□□ -1.58
HMGCS1Q01581 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGCS1Q01581 AC002525.1-201ENST00000624392 1622 ntBASIC5.17□□□□□ -1.58
HMGCS1Q01581 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGCS1Q01581 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
HMGCS1Q01581 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGCS1Q01581 RNA5SP122-201ENST00000384457 108 ntBASIC5.17□□□□□ -1.58
HMGCS1Q01581 GABARAPL3-201ENST00000412799 354 ntBASIC5.17□□□□□ -1.58
HMGCS1Q01581 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGCS1Q01581 GSTM5P1-201ENST00000434751 660 ntBASIC5.17□□□□□ -1.58
HMGCS1Q01581 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGCS1Q01581 AC016772.1-201ENST00000444170 1261 ntBASIC5.17□□□□□ -1.58
HMGCS1Q01581 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.17□□□□□ -1.58
HMGCS1Q01581 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms