Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC3.68□□□□□ -1.82
RPL39P62891 AC012616.1-201ENST00000600294 197 ntBASIC3.68□□□□□ -1.82
RPL39P62891 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC3.68□□□□□ -1.82
RPL39P62891 AC011500.1-201ENST00000601963 469 ntBASIC3.68□□□□□ -1.82
RPL39P62891 AC009597.2-201ENST00000604659 592 ntBASIC3.68□□□□□ -1.82
RPL39P62891 AL031601.1-201ENST00000605702 394 ntBASIC3.68□□□□□ -1.82
RPL39P62891 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC3.68□□□□□ -1.82
RPL39P62891 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC3.68□□□□□ -1.82
RPL39P62891 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC3.68□□□□□ -1.82
RPL39P62891 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC3.68□□□□□ -1.82
RPL39P62891 AL118522.2-201ENST00000616045 615 ntBASIC3.68□□□□□ -1.82
RPL39P62891 AC005899.6-201ENST00000620729 297 ntBASIC3.68□□□□□ -1.82
RPL39P62891 AC103703.1-201ENST00000634783 663 ntBASIC3.68□□□□□ -1.82
RPL39P62891 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
RPL39P62891 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RPL39P62891 AC006210.2-201ENST00000367074 1545 ntBASIC3.68□□□□□ -1.82
RPL39P62891 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RPL39P62891 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RPL39P62891 ZNF652P1-201ENST00000442420 1309 ntBASIC3.68□□□□□ -1.82
RPL39P62891 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RPL39P62891 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RPL39P62891 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
RPL39P62891 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RPL39P62891 AL672167.1-205ENST00000641112 3080 ntBASIC3.67□□□□□ -1.82
RPL39P62891 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RPL39P62891 AC104260.2-201ENST00000623551 3497 ntBASIC3.67□□□□□ -1.82
RPL39P62891 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
RPL39P62891 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RPL39P62891 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RPL39P62891 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RPL39P62891 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RPL39P62891 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.67□□□□□ -1.82
RPL39P62891 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RPL39P62891 AC005294.1-201ENST00000355509 281 ntBASIC3.67□□□□□ -1.82
RPL39P62891 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC3.67□□□□□ -1.82
RPL39P62891 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
RPL39P62891 NFU1P1-201ENST00000413128 774 ntBASIC3.67□□□□□ -1.82
RPL39P62891 AL359885.1-201ENST00000415786 903 ntBASIC3.67□□□□□ -1.82
RPL39P62891 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RPL39P62891 AL133173.1-201ENST00000423458 397 ntBASIC3.67□□□□□ -1.82
RPL39P62891 KCTD9P1-201ENST00000430462 1167 ntBASIC3.67□□□□□ -1.82
RPL39P62891 AL389925.1-201ENST00000432257 728 ntBASIC3.67□□□□□ -1.82
RPL39P62891 KATNBL1P2-201ENST00000433311 835 ntBASIC3.67□□□□□ -1.82
RPL39P62891 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RPL39P62891 RPL35AP21-201ENST00000437667 333 ntBASIC3.67□□□□□ -1.82
RPL39P62891 AL512637.1-201ENST00000439523 1231 ntBASIC3.67□□□□□ -1.82
RPL39P62891 AMYP1-201ENST00000440059 1023 ntBASIC3.67□□□□□ -1.82
RPL39P62891 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC3.67□□□□□ -1.82
RPL39P62891 MRPL35P2-201ENST00000448009 511 ntBASIC3.67□□□□□ -1.82
RPL39P62891 BTF3P6-201ENST00000448054 499 ntBASIC3.67□□□□□ -1.82
RPL39P62891 DNAJB5P1-201ENST00000454004 806 ntBASIC3.67□□□□□ -1.82
RPL39P62891 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC3.67□□□□□ -1.82
RPL39P62891 RN7SL423P-201ENST00000486202 304 ntBASIC3.67□□□□□ -1.82
RPL39P62891 RN7SL568P-201ENST00000493069 298 ntBASIC3.67□□□□□ -1.82
RPL39P62891 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC3.67□□□□□ -1.82
RPL39P62891 HSD3BP3-201ENST00000514706 994 ntBASIC3.67□□□□□ -1.82
RPL39P62891 RNA5SP303-201ENST00000516192 130 ntBASIC3.67□□□□□ -1.82
RPL39P62891 RN7SKP99-201ENST00000517028 307 ntBASIC3.67□□□□□ -1.82
RPL39P62891 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC3.67□□□□□ -1.82
RPL39P62891 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC3.67□□□□□ -1.82
RPL39P62891 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RPL39P62891 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC3.67□□□□□ -1.82
RPL39P62891 AC068305.2-201ENST00000550567 1205 ntBASIC3.67□□□□□ -1.82
RPL39P62891 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC3.67□□□□□ -1.82
RPL39P62891 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC3.67□□□□□ -1.82
RPL39P62891 AL162431.4-201ENST00000604674 411 ntBASIC3.67□□□□□ -1.82
RPL39P62891 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RPL39P62891 AC007204.1-201ENST00000621794 555 ntBASIC3.67□□□□□ -1.82
RPL39P62891 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC3.67□□□□□ -1.82
RPL39P62891 AC015871.5-202ENST00000623252 701 ntBASIC3.67□□□□□ -1.82
RPL39P62891 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC3.67□□□□□ -1.82
RPL39P62891 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RPL39P62891 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
RPL39P62891 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
RPL39P62891 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RPL39P62891 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
RPL39P62891 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
RPL39P62891 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RPL39P62891 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RPL39P62891 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
RPL39P62891 AC005261.6-201ENST00000623072 1387 ntBASIC3.66□□□□□ -1.82
RPL39P62891 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
RPL39P62891 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC3.66□□□□□ -1.82
RPL39P62891 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RPL39P62891 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3.66□□□□□ -1.82
RPL39P62891 SCARNA15-201ENST00000607520 4325 ntBASIC3.66□□□□□ -1.82
RPL39P62891 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RPL39P62891 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RPL39P62891 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RPL39P62891 RNA5SP394-201ENST00000364216 119 ntBASIC3.66□□□□□ -1.82
RPL39P62891 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
RPL39P62891 UBBP2-201ENST00000376781 231 ntBASIC3.66□□□□□ -1.82
RPL39P62891 AC013442.1-201ENST00000397347 228 ntBASIC3.66□□□□□ -1.82
RPL39P62891 AL390316.1-201ENST00000406279 553 ntBASIC3.66□□□□□ -1.82
RPL39P62891 GAPDHP42-201ENST00000406848 981 ntBASIC3.66□□□□□ -1.82
RPL39P62891 U3.32-201ENST00000408116 212 ntBASIC3.66□□□□□ -1.82
RPL39P62891 MIR1271-201ENST00000408537 86 ntBASIC3.66□□□□□ -1.82
RPL39P62891 AC245060.4-201ENST00000413293 1121 ntBASIC3.66□□□□□ -1.82
RPL39P62891 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC3.66□□□□□ -1.82
RPL39P62891 RPL36AP10-201ENST00000421785 322 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms