Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.05□□□□□ -1.6
RPS4XP62701 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.05□□□□□ -1.6
RPS4XP62701 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.05□□□□□ -1.6
RPS4XP62701 MIR4489-201ENST00000578869 62 ntBASIC5.05□□□□□ -1.6
RPS4XP62701 MIR4505-201ENST00000582238 73 ntBASIC5.05□□□□□ -1.6
RPS4XP62701 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.05□□□□□ -1.6
RPS4XP62701 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.05□□□□□ -1.6
RPS4XP62701 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.05□□□□□ -1.6
RPS4XP62701 FO393422.1-201ENST00000603908 708 ntBASIC5.05□□□□□ -1.6
RPS4XP62701 AC104695.2-201ENST00000605056 775 ntBASIC5.05□□□□□ -1.6
RPS4XP62701 GMCL1P2-201ENST00000605230 823 ntBASIC5.05□□□□□ -1.6
RPS4XP62701 AP000864.1-201ENST00000609424 650 ntBASIC5.05□□□□□ -1.6
RPS4XP62701 AL162574.1-201ENST00000615702 950 ntBASIC5.05□□□□□ -1.6
RPS4XP62701 NLRP3P1-201ENST00000622303 1785 ntBASIC5.05□□□□□ -1.6
RPS4XP62701 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
RPS4XP62701 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RPS4XP62701 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RPS4XP62701 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RPS4XP62701 LINC01963-201ENST00000562038 3148 ntBASIC5.05□□□□□ -1.6
RPS4XP62701 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RPS4XP62701 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RPS4XP62701 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RPS4XP62701 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RPS4XP62701 AC079097.1-201ENST00000512187 1399 ntBASIC5.04□□□□□ -1.6
RPS4XP62701 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPS4XP62701 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RPS4XP62701 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RPS4XP62701 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.04□□□□□ -1.6
RPS4XP62701 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.04□□□□□ -1.6
RPS4XP62701 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPS4XP62701 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPS4XP62701 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.04□□□□□ -1.6
RPS4XP62701 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RPS4XP62701 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RPS4XP62701 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RPS4XP62701 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPS4XP62701 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPS4XP62701 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RPS4XP62701 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.04□□□□□ -1.6
RPS4XP62701 RN7SKP160-201ENST00000363804 340 ntBASIC5.04□□□□□ -1.6
RPS4XP62701 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPS4XP62701 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.04□□□□□ -1.6
RPS4XP62701 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPS4XP62701 HMGB1P20-201ENST00000402555 677 ntBASIC5.04□□□□□ -1.6
RPS4XP62701 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.04□□□□□ -1.6
RPS4XP62701 AL133482.1-201ENST00000415988 498 ntBASIC5.04□□□□□ -1.6
RPS4XP62701 AC009506.2-201ENST00000420635 840 ntBASIC5.04□□□□□ -1.6
RPS4XP62701 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.04□□□□□ -1.6
RPS4XP62701 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPS4XP62701 AC127526.2-201ENST00000426436 775 ntBASIC5.04□□□□□ -1.6
RPS4XP62701 AC009784.1-201ENST00000426484 460 ntBASIC5.04□□□□□ -1.6
RPS4XP62701 NDUFB4P8-201ENST00000435351 367 ntBASIC5.04□□□□□ -1.6
RPS4XP62701 AL359265.1-201ENST00000440296 795 ntBASIC5.04□□□□□ -1.6
RPS4XP62701 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.04□□□□□ -1.6
RPS4XP62701 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.04□□□□□ -1.6
RPS4XP62701 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.04□□□□□ -1.6
RPS4XP62701 RPS23P6-201ENST00000466136 431 ntBASIC5.04□□□□□ -1.6
RPS4XP62701 RPS26P39-201ENST00000469206 341 ntBASIC5.04□□□□□ -1.6
RPS4XP62701 CR383656.1-201ENST00000484916 377 ntBASIC5.04□□□□□ -1.6
RPS4XP62701 AC008638.1-201ENST00000506035 866 ntBASIC5.04□□□□□ -1.6
RPS4XP62701 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
RPS4XP62701 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.04□□□□□ -1.6
RPS4XP62701 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.04□□□□□ -1.6
RPS4XP62701 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPS4XP62701 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.04□□□□□ -1.6
RPS4XP62701 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.04□□□□□ -1.6
RPS4XP62701 AL359715.3-201ENST00000569267 2123 ntBASIC5.04□□□□□ -1.6
RPS4XP62701 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RPS4XP62701 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.04□□□□□ -1.6
RPS4XP62701 AC010632.3-201ENST00000611377 369 ntBASIC5.04□□□□□ -1.6
RPS4XP62701 RN7SL544P-201ENST00000617232 284 ntBASIC5.04□□□□□ -1.6
RPS4XP62701 RN7SL763P-201ENST00000620922 284 ntBASIC5.04□□□□□ -1.6
RPS4XP62701 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RPS4XP62701 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.04□□□□□ -1.6
RPS4XP62701 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPS4XP62701 AC004656.1-201ENST00000568479 4951 ntBASIC5.04□□□□□ -1.6
RPS4XP62701 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.04□□□□□ -1.6
RPS4XP62701 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.04□□□□□ -1.6
RPS4XP62701 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RPS4XP62701 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RPS4XP62701 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPS4XP62701 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
RPS4XP62701 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RPS4XP62701 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPS4XP62701 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RPS4XP62701 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.03□□□□□ -1.6
RPS4XP62701 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
RPS4XP62701 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RPS4XP62701 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.03□□□□□ -1.6
RPS4XP62701 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
RPS4XP62701 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPS4XP62701 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.03□□□□□ -1.6
RPS4XP62701 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPS4XP62701 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPS4XP62701 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPS4XP62701 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RPS4XP62701 AC092681.1-201ENST00000297369 291 ntBASIC5.03□□□□□ -1.6
RPS4XP62701 RNA5SP132-201ENST00000364725 118 ntBASIC5.03□□□□□ -1.6
RPS4XP62701 SNORA70.6-201ENST00000383934 134 ntBASIC5.03□□□□□ -1.6
RPS4XP62701 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms