Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RPS3AP61247 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.54□□□□□ -1.52
RPS3AP61247 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RPS3AP61247 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.54□□□□□ -1.52
RPS3AP61247 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RPS3AP61247 EIF3EP1-201ENST00000433978 1316 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RPS3AP61247 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RPS3AP61247 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RPS3AP61247 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
RPS3AP61247 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RPS3AP61247 COX6B1P3-201ENST00000312310 260 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 SNORA21-201ENST00000362423 132 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 RNU1-134P-201ENST00000362935 165 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.54□□□□□ -1.52
RPS3AP61247 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RPS3AP61247 EI24P3-201ENST00000399046 1062 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 TAF9BP2-201ENST00000400856 499 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.54□□□□□ -1.52
RPS3AP61247 AL132875.1-201ENST00000403623 949 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 AL034374.1-201ENST00000406329 351 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.54□□□□□ -1.52
RPS3AP61247 MARK2P12-201ENST00000420129 585 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.54□□□□□ -1.52
RPS3AP61247 AMYP1-201ENST00000440059 1023 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 TRIM60P16-201ENST00000444048 694 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.54□□□□□ -1.52
RPS3AP61247 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.54□□□□□ -1.52
RPS3AP61247 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.54□□□□□ -1.52
RPS3AP61247 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.54□□□□□ -1.52
RPS3AP61247 AC117394.1-201ENST00000477323 567 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 NPM1P17-201ENST00000479221 602 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.54□□□□□ -1.52
RPS3AP61247 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.54□□□□□ -1.52
RPS3AP61247 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.54□□□□□ -1.52
RPS3AP61247 AC111000.6-201ENST00000514471 709 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 RNU6-513P-201ENST00000516104 104 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 RNU6-1102P-201ENST00000516149 96 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.54□□□□□ -1.52
RPS3AP61247 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.54□□□□□ -1.52
RPS3AP61247 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.54□□□□□ -1.52
RPS3AP61247 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.54□□□□□ -1.52
RPS3AP61247 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.54□□□□□ -1.52
RPS3AP61247 MIR4701-201ENST00000583094 63 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 CBX3P2-202ENST00000583365 535 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.54□□□□□ -1.52
RPS3AP61247 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.54□□□□□ -1.52
RPS3AP61247 AC098483.2-201ENST00000603158 454 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 AL591167.1-201ENST00000607321 456 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 FAM72A-208ENST00000607379 1139 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 AC092266.1-201ENST00000610958 165 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 AC022106.1-201ENST00000612834 766 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RPS3AP61247 AC245389.2-201ENST00000616023 576 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 MIR6071-201ENST00000616741 78 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 AC242843.1-201ENST00000618702 573 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 AC074140.1-201ENST00000621617 208 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RPS3AP61247 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RPS3AP61247 AL133243.2-201ENST00000610331 1621 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 AC093225.1-201ENST00000506867 1408 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.54□□□□□ -1.52
RPS3AP61247 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
RPS3AP61247 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RPS3AP61247 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RPS3AP61247 AC007382.1-201ENST00000624376 2618 ntBASIC5.54□□□□□ -1.52
RPS3AP61247 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RPS3AP61247 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.54□□□□□ -1.52
RPS3AP61247 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RPS3AP61247 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
RPS3AP61247 NXF4-202ENST00000416098 1465 ntBASIC5.53□□□□□ -1.52
RPS3AP61247 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.53□□□□□ -1.52
RPS3AP61247 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
RPS3AP61247 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RPS3AP61247 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RPS3AP61247 RNU6-609P-201ENST00000365459 107 ntBASIC5.53□□□□□ -1.52
RPS3AP61247 RNU6-650P-201ENST00000365658 111 ntBASIC5.53□□□□□ -1.52
RPS3AP61247 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.53□□□□□ -1.52
RPS3AP61247 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.53□□□□□ -1.52
RPS3AP61247 RPL12P12-201ENST00000424633 501 ntBASIC5.53□□□□□ -1.52
RPS3AP61247 AC002069.1-201ENST00000429649 1159 ntBASIC5.53□□□□□ -1.52
RPS3AP61247 PTP4A1P3-201ENST00000433661 420 ntBASIC5.53□□□□□ -1.52
RPS3AP61247 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.53□□□□□ -1.52
RPS3AP61247 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.53□□□□□ -1.52
RPS3AP61247 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.53□□□□□ -1.52
RPS3AP61247 PSMC1P13-201ENST00000458195 985 ntBASIC5.53□□□□□ -1.52
RPS3AP61247 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.53□□□□□ -1.52
RPS3AP61247 AP002884.1-201ENST00000479691 655 ntBASIC5.53□□□□□ -1.52
RPS3AP61247 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.53□□□□□ -1.52
RPS3AP61247 CDH12P2-201ENST00000504393 298 ntBASIC5.53□□□□□ -1.52
RPS3AP61247 OR7E99P-201ENST00000505750 922 ntBASIC5.53□□□□□ -1.52
RPS3AP61247 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.53□□□□□ -1.52
RPS3AP61247 CYP4F27P-201ENST00000514557 494 ntBASIC5.53□□□□□ -1.52
RPS3AP61247 TMEM97P2-201ENST00000517841 403 ntBASIC5.53□□□□□ -1.52
RPS3AP61247 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.53□□□□□ -1.52
RPS3AP61247 VTA1P2-201ENST00000520205 911 ntBASIC5.53□□□□□ -1.52
RPS3AP61247 AP000859.1-201ENST00000525536 307 ntBASIC5.53□□□□□ -1.52
RPS3AP61247 AP003396.4-201ENST00000527574 265 ntBASIC5.53□□□□□ -1.52
RPS3AP61247 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.53□□□□□ -1.52
RPS3AP61247 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms