Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
RHBDL3P58872 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.83□□□□□ -1.32
RHBDL3P58872 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
RHBDL3P58872 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RHBDL3P58872 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RHBDL3P58872 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RHBDL3P58872 AL161756.3-201ENST00000641216 2071 ntBASIC6.82□□□□□ -1.32
RHBDL3P58872 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
RHBDL3P58872 RAD1P1-201ENST00000231383 813 ntBASIC6.82□□□□□ -1.32
RHBDL3P58872 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RHBDL3P58872 OR9K1P-201ENST00000326513 941 ntBASIC6.82□□□□□ -1.32
RHBDL3P58872 SNORA70H-201ENST00000383910 135 ntBASIC6.82□□□□□ -1.32
RHBDL3P58872 SNORA70J-201ENST00000384182 135 ntBASIC6.82□□□□□ -1.32
RHBDL3P58872 RNU6-31P-201ENST00000384388 108 ntBASIC6.82□□□□□ -1.32
RHBDL3P58872 MIR130A-201ENST00000385274 89 ntBASIC6.82□□□□□ -1.32
RHBDL3P58872 AL121835.1-201ENST00000404250 354 ntBASIC6.82□□□□□ -1.32
RHBDL3P58872 Z86062.1-201ENST00000406773 777 ntBASIC6.82□□□□□ -1.32
RHBDL3P58872 RNU4-64P-201ENST00000410795 131 ntBASIC6.82□□□□□ -1.32
RHBDL3P58872 AL133173.1-201ENST00000423458 397 ntBASIC6.82□□□□□ -1.32
RHBDL3P58872 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.82□□□□□ -1.32
RHBDL3P58872 AC019185.1-201ENST00000442718 389 ntBASIC6.82□□□□□ -1.32
RHBDL3P58872 AL450996.1-201ENST00000445574 1202 ntBASIC6.82□□□□□ -1.32
RHBDL3P58872 AL353718.1-201ENST00000451028 517 ntBASIC6.82□□□□□ -1.32
RHBDL3P58872 AP000547.1-201ENST00000454360 617 ntBASIC6.82□□□□□ -1.32
RHBDL3P58872 LDHBP2-201ENST00000456969 1005 ntBASIC6.82□□□□□ -1.32
RHBDL3P58872 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.82□□□□□ -1.32
RHBDL3P58872 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.82□□□□□ -1.32
RHBDL3P58872 AL355032.1-201ENST00000472981 438 ntBASIC6.82□□□□□ -1.32
RHBDL3P58872 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.82□□□□□ -1.32
RHBDL3P58872 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.82□□□□□ -1.32
RHBDL3P58872 SUMO1P1-201ENST00000497904 306 ntBASIC6.82□□□□□ -1.32
RHBDL3P58872 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.82□□□□□ -1.32
RHBDL3P58872 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.82□□□□□ -1.32
RHBDL3P58872 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.82□□□□□ -1.32
RHBDL3P58872 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.82□□□□□ -1.32
RHBDL3P58872 AC027667.1-201ENST00000545814 304 ntBASIC6.82□□□□□ -1.32
RHBDL3P58872 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.82□□□□□ -1.32
RHBDL3P58872 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.82□□□□□ -1.32
RHBDL3P58872 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.82□□□□□ -1.32
RHBDL3P58872 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.82□□□□□ -1.32
RHBDL3P58872 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.82□□□□□ -1.32
RHBDL3P58872 AC005242.1-201ENST00000585658 438 ntBASIC6.82□□□□□ -1.32
RHBDL3P58872 AL355802.4-201ENST00000607635 548 ntBASIC6.82□□□□□ -1.32
RHBDL3P58872 AL390318.1-201ENST00000624564 687 ntBASIC6.82□□□□□ -1.32
RHBDL3P58872 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RHBDL3P58872 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RHBDL3P58872 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.82□□□□□ -1.32
RHBDL3P58872 AP004607.3-201ENST00000530354 3915 ntBASIC6.82□□□□□ -1.32
RHBDL3P58872 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RHBDL3P58872 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.82□□□□□ -1.32
RHBDL3P58872 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
RHBDL3P58872 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RHBDL3P58872 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RHBDL3P58872 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.82□□□□□ -1.32
RHBDL3P58872 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.82□□□□□ -1.32
RHBDL3P58872 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RHBDL3P58872 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
RHBDL3P58872 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.81□□□□□ -1.32
RHBDL3P58872 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RHBDL3P58872 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
RHBDL3P58872 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.81□□□□□ -1.32
RHBDL3P58872 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RHBDL3P58872 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC6.81□□□□□ -1.32
RHBDL3P58872 RNU6-171P-201ENST00000384354 107 ntBASIC6.81□□□□□ -1.32
RHBDL3P58872 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
RHBDL3P58872 RNU2-72P-201ENST00000411175 163 ntBASIC6.81□□□□□ -1.32
RHBDL3P58872 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.81□□□□□ -1.32
RHBDL3P58872 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.81□□□□□ -1.32
RHBDL3P58872 AL590806.1-201ENST00000415818 853 ntBASIC6.81□□□□□ -1.32
RHBDL3P58872 AC073464.3-201ENST00000422564 712 ntBASIC6.81□□□□□ -1.32
RHBDL3P58872 AL355433.1-201ENST00000422804 300 ntBASIC6.81□□□□□ -1.32
RHBDL3P58872 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.81□□□□□ -1.32
RHBDL3P58872 OR7E116P-201ENST00000448529 957 ntBASIC6.81□□□□□ -1.32
RHBDL3P58872 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.81□□□□□ -1.32
RHBDL3P58872 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.81□□□□□ -1.32
RHBDL3P58872 RN7SL799P-201ENST00000475891 298 ntBASIC6.81□□□□□ -1.32
RHBDL3P58872 RN7SL547P-201ENST00000490793 290 ntBASIC6.81□□□□□ -1.32
RHBDL3P58872 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.81□□□□□ -1.32
RHBDL3P58872 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.81□□□□□ -1.32
RHBDL3P58872 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.81□□□□□ -1.32
RHBDL3P58872 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.81□□□□□ -1.32
RHBDL3P58872 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.81□□□□□ -1.32
RHBDL3P58872 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.81□□□□□ -1.32
RHBDL3P58872 AP000859.1-201ENST00000525536 307 ntBASIC6.81□□□□□ -1.32
RHBDL3P58872 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.81□□□□□ -1.32
RHBDL3P58872 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC6.81□□□□□ -1.32
RHBDL3P58872 AC027176.2-201ENST00000559166 746 ntBASIC6.81□□□□□ -1.32
RHBDL3P58872 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.81□□□□□ -1.32
RHBDL3P58872 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.81□□□□□ -1.32
RHBDL3P58872 AC021483.2-201ENST00000567415 758 ntBASIC6.81□□□□□ -1.32
RHBDL3P58872 AC015720.2-201ENST00000567709 334 ntBASIC6.81□□□□□ -1.32
RHBDL3P58872 AC013244.1-201ENST00000604279 193 ntBASIC6.81□□□□□ -1.32
RHBDL3P58872 AC006840.1-201ENST00000623069 542 ntBASIC6.81□□□□□ -1.32
RHBDL3P58872 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
RHBDL3P58872 AC099654.6-201ENST00000636487 512 ntBASIC6.81□□□□□ -1.32
RHBDL3P58872 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.81□□□□□ -1.32
RHBDL3P58872 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.81□□□□□ -1.32
RHBDL3P58872 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RHBDL3P58872 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RHBDL3P58872 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms