Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.69□□□□□ -1.5
CLRN1P58418 AC037479.1-201ENST00000558361 625 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 HMGN1P26-201ENST00000558737 303 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 AC009120.3-201ENST00000563335 499 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.69□□□□□ -1.5
CLRN1P58418 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC5.69□□□□□ -1.5
CLRN1P58418 AC022662.1-201ENST00000580252 331 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLRN1P58418 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.69□□□□□ -1.5
CLRN1P58418 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLRN1P58418 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CLRN1P58418 FRG1HP-204ENST00000617940 757 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC5.69□□□□□ -1.5
CLRN1P58418 AL157770.1-201ENST00000623049 439 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.69□□□□□ -1.5
CLRN1P58418 LINC01808-202ENST00000641680 1116 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLRN1P58418 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLRN1P58418 AC006511.3-201ENST00000624929 1783 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.69□□□□□ -1.5
CLRN1P58418 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLRN1P58418 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLRN1P58418 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLRN1P58418 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLRN1P58418 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLRN1P58418 AC020656.2-201ENST00000613291 5309 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLRN1P58418 AC022034.1-201ENST00000512867 2156 ntBASIC5.69□□□□□ -1.5
CLRN1P58418 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
CLRN1P58418 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
CLRN1P58418 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLRN1P58418 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLRN1P58418 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.68□□□□□ -1.5
CLRN1P58418 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLRN1P58418 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLRN1P58418 AL731532.1-201ENST00000623972 4236 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLRN1P58418 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLRN1P58418 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLRN1P58418 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.68□□□□□ -1.5
CLRN1P58418 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLRN1P58418 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLRN1P58418 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLRN1P58418 SNORD35A-201ENST00000363389 86 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 SNORD8-201ENST00000363915 110 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.68□□□□□ -1.5
CLRN1P58418 AP003170.5-201ENST00000397185 335 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 ARSFP1-201ENST00000398758 477 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 RPL23AP59-201ENST00000399415 461 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 OR7E156P-201ENST00000400303 464 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 BTF3L4P1-201ENST00000413813 468 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.68□□□□□ -1.5
CLRN1P58418 AL590806.1-201ENST00000415818 853 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 OR4K6P-201ENST00000416478 897 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.68□□□□□ -1.5
CLRN1P58418 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 AL034379.1-201ENST00000423216 253 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 AC083862.1-201ENST00000427378 1242 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 AL589823.1-201ENST00000429577 183 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.68□□□□□ -1.5
CLRN1P58418 KCTD10P1-201ENST00000434203 625 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 RPEP4-201ENST00000437636 602 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.68□□□□□ -1.5
CLRN1P58418 GTF2IP14-201ENST00000441415 586 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 CUBNP2-201ENST00000443534 1139 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.68□□□□□ -1.5
CLRN1P58418 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.68□□□□□ -1.5
CLRN1P58418 VPS25P1-201ENST00000455691 508 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 AL133477.1-201ENST00000457472 514 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 RNU7-140P-201ENST00000459546 60 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.68□□□□□ -1.5
CLRN1P58418 AC015524.1-201ENST00000491585 472 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 AC111000.2-201ENST00000507775 550 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.68□□□□□ -1.5
CLRN1P58418 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.68□□□□□ -1.5
CLRN1P58418 FABP5P12-201ENST00000515543 389 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.68□□□□□ -1.5
CLRN1P58418 MTCO3P15-201ENST00000526563 574 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLRN1P58418 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.68□□□□□ -1.5
CLRN1P58418 CYP2C60P-201ENST00000566088 139 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.68□□□□□ -1.5
CLRN1P58418 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.68□□□□□ -1.5
CLRN1P58418 CCDC58P1-201ENST00000578567 430 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 AC018690.1-201ENST00000608144 626 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.68□□□□□ -1.5
CLRN1P58418 AC013562.2-201ENST00000611632 603 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 AC139769.3-201ENST00000618383 175 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 AC018659.2-201ENST00000624690 715 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.68□□□□□ -1.5
CLRN1P58418 AC063952.1-203ENST00000634410 658 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLRN1P58418 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLRN1P58418 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLRN1P58418 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.68□□□□□ -1.5
CLRN1P58418 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLRN1P58418 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLRN1P58418 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms